New model in OGS2.0 | DPOGS206817  |
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Genomic Position | scaffold1:- 3346108-3350827 |
See gene structure | |
CDS Length | 1008 |
Paired RNAseq reads   | 118 |
Single RNAseq reads   | 330 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012760 (5e-32) |
Best Drosophila hit   | CG3639 (2e-25) |
Best Human hit | peroxisome assembly protein 12 (8e-30) |
Best NR hit (blastp)   | PREDICTED: similar to peroxisome assembly protein 12 [Tribolium castaneum] (1e-52) |
Best NR hit (blastx)   | PREDICTED: similar to peroxisome assembly protein 12 [Tribolium castaneum] (3e-47) |
GeneOntology terms    | GO:0008022 protein C-terminus binding GO:0046872 metal ion binding GO:0005778 peroxisomal membrane GO:0008270 zinc ion binding GO:0005777 peroxisome GO:0016020 membrane GO:0016021 integral to membrane GO:0007031 peroxisome organization GO:0016558 protein import into peroxisome matrix |
InterPro families    | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR006845 Pex, N-terminal IPR001841 Zinc finger, RING-type |
Orthology group | MCL12370 |
Nucleotide sequence:
ATGGCAGTTTACGCTGCTCATTTGACCCGCACGTTACAGGGGACGCCGTCGGTCTTTCAG
GTGACTGCGCAGGAAGCCCTCGGATCTACAGTAAAGCCCGCGCTACGAAAACTTGTTGAA
TATTTAGCAGCAGTATATCCTGATAAGCTTAGTTGGAGTGAGCGATGGTATGATGAGTTG
TACCTACTGTTGGACTGCATAGTTCAATACCATTATCTCAAACATTATGCTGCTTCTTTT
TCTGAGAGCTTCTATGGCTTGGTGAGGTCACCAATAAGTCCAAATCATGAGTTCAATTCA
GGCCCCCGTTTACCGCATAAGCTTGAGCAAGCCTCATTACTATTCCTAGTGGGACTGCCT
TATATGCAGGACAAGATTGATAAAATATTGGAGGGATGGAGAGAAGAACTGGACGAAGGA
CGCCTTGGTAAGAGTAAAGGAGATCAAGCCTGTAAAGCAGCCATCAGACTATACAAAATA
TCAAATTTTGTGGGTGAGGTCAGCAAATTGGTGGTATTGGCCCAATACTTGACTGGCAAG
AGCCCGTCTCCTACATTGTCACTGCAAATTTTGGGGTTAACATTAAAAGATGCACCCTCA
GAGGAACCAGATGATAATTCTTGGGGGGATTTGTTCAGAAATGTATTGATGGGACAATTT
AGCAGTGCGGTGTTATCCTTTCGAATGTGTGTCGCAGCATGTCGACTTCTTATGGAACGT
GGTGCGTTCGTGGTACAACTGCTTAGGTGGTGGGAGTCTCGTGCCCCCGCAGCATGTTCC
GCGCTACCTCCACCACCACCACCTCAAGCACGGAGAGACGAGTACCGATGGTTGAACGCA
TGCCCTATATGTCTTCAATCGTGGAGGGTGCCCACCGTGTTGCCAGTGTCAGGTTACGTG
TTCTGCTACACGTGTATCTCCCGTCATTTACGTCGCTCGGGCTCGTGTCCCGTAACGAGG
CTTCCGGCCAGCGAGCGCTCACTGGTCAGGCTGTACCTGGACCTGTGA
Protein sequence:
MAVYAAHLTRTLQGTPSVFQVTAQEALGSTVKPALRKLVEYLAAVYPDKLSWSERWYDEL
YLLLDCIVQYHYLKHYAASFSESFYGLVRSPISPNHEFNSGPRLPHKLEQASLLFLVGLP
YMQDKIDKILEGWREELDEGRLGKSKGDQACKAAIRLYKISNFVGEVSKLVVLAQYLTGK
SPSPTLSLQILGLTLKDAPSEEPDDNSWGDLFRNVLMGQFSSAVLSFRMCVAACRLLMER
GAFVVQLLRWWESRAPAACSALPPPPPPQARRDEYRWLNACPICLQSWRVPTVLPVSGYV
FCYTCISRHLRRSGSCPVTRLPASERSLVRLYLDL