| New model in OGS2.0 | DPOGS206835 |
|---|---|
| Genomic Position | scaffold1:- 2928169-2935398 |
| See gene structure | |
| CDS Length | 1509 |
| Paired RNAseq reads | 321 |
| Single RNAseq reads | 812 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012782 (1e-13) |
| Best Drosophila hit | ND |
| Best Human hit | TRAF-type zinc finger domain-containing protein 1 (2e-23) |
| Best NR hit (blastp) | TRAF-type zinc finger domain containing 1 [Xenopus laevis] (1e-27) |
| Best NR hit (blastx) | TRAF-type zinc finger domain containing 1 [Xenopus laevis] (1e-24) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005515 protein binding GO:0005575 cellular_component GO:0005622 intracellular GO:0008270 zinc ion binding GO:0034097 response to cytokine stimulus GO:0045824 negative regulation of innate immune response GO:0046872 metal ion binding |
| InterPro families | IPR001293 Zinc finger, TRAF-type |
| Orthology group | MCL24219 |
Nucleotide sequence:
ATGGAAGAAGCGGAGAATAAGGTTTGCCATAACTGCAAGCGTGAGATACCTCTCGCTAAC
TTCACGATTCACGCGGTGCATTGCGCTCGCAATATCCGACTTTGTCCTGTTTGCAAGGAG
CCGGTGCCTGTGCAGGACTTGCAGCAACATCATGACGACCAACACAAGCTTGTACCATGC
AAGCAGTGCGGCGAGGACGTATGCGGTACCGATATGGAGGATCACGTGAGGGACTCGTGC
GCACTCACCATGCAGACTTGCAGATTCTGTACCCTAGAGCTGCGTCGCCGCGAGCTGCCC
GCCCACGAGCGGTACTGCGGCGCGCGCACCGAGCTGTGCGAGTGTGGCGAGTGGGTCATG
ATGAAGTATAGGCAGCTGCACATCGACTCCAACCACGGGTTTATCAGACTCGATGATGAC
CCAGTACCAATACAAAGTATTAAGGCGTCAGTGTCGAAGCAGAAGGTTACAACAGATAAA
ACACCTCTGTCAAACGGACTGAATAATTTAAATCGTTCAGCATTCCCACGGAAGAACAAT
TCAAGAGACTTGAACACTGCTGCTGATCAAACAGCCTCCACAAGTTCACAAAAACCCACC
GCTATGGCCAGTACCAGTAAGGGGAACAGTTCAAAGACGAAAGAGGAAAATATTACGAAC
GCCAACGGAGCTATTCCCAGGGCGAAAAGAATAGAGAGACAGCATCCAGGGAATGATAGT
AAAGATAAAGTAAAGAACTCTAGTTCCCGTGGTTCCATGAAGAAGCGGCCTGCTCCTCCT
CCCCCCGCTTCCTCGGCGCCCGTGCTGCAGGCAGCACTCCAGCGACAGCAGCGAGAGGAA
ACGCAGCGGCAACTTCAGAACCAGGAGAATTTGGCAAGGGGTCTGCCGCCGATTCTGAAC
CCAGCTGAGAAATTAGAGAGGCTTCGGAAAATGGACGCTCTTCACCAAAGGGAACCAGAC
GACCAGTCATGGAAGAACCGGCTGCAAGGAAGAGTGTGGTCGAGGCCACATGTCTACCCC
ATCGGTCACGTCCTTAGTGGACAGACGGATGTGGCCGGTGAAGTGAGGAAGGAACTAAAA
AACTTAAAGCCGATGACTCCCGAGGAGTTCAATGACAGATATAGAAACATTCAAAGTGAA
AGACAGGACCGATTCAAAGAGATAAAGACCTCTTTAAGGGAACTAAGGAGAGGACTCAAT
GAGGTCATAGCGCCGTACAATTCAAACTCAAACGCAGACACCAATCACAGTCGTCATGAG
GAGGAGGCTCCATGCGAGTTCTGCGGCACCAGCGTCCTGCTGGAAGATCTGGTCCTGCAT
CAGACCGGTTGCCGGCCGGACCTGGCCCAGTACCGCAGTCCGCCCCCCTCCCCTGGCCCT
CGCCCCCCCGCAGAGCCCCCCGCCCCGCAGAGCTTCCCGCTCGCCGGATCCCCCCGCGCC
TCTCATACCCTGCGAGTTCTGTACCAGATTGTTGCCCGTGCATCTCGTATGCCACCACCA
GGTGACTGA
Protein sequence:
MEEAENKVCHNCKREIPLANFTIHAVHCARNIRLCPVCKEPVPVQDLQQHHDDQHKLVPC
KQCGEDVCGTDMEDHVRDSCALTMQTCRFCTLELRRRELPAHERYCGARTELCECGEWVM
MKYRQLHIDSNHGFIRLDDDPVPIQSIKASVSKQKVTTDKTPLSNGLNNLNRSAFPRKNN
SRDLNTAADQTASTSSQKPTAMASTSKGNSSKTKEENITNANGAIPRAKRIERQHPGNDS
KDKVKNSSSRGSMKKRPAPPPPASSAPVLQAALQRQQREETQRQLQNQENLARGLPPILN
PAEKLERLRKMDALHQREPDDQSWKNRLQGRVWSRPHVYPIGHVLSGQTDVAGEVRKELK
NLKPMTPEEFNDRYRNIQSERQDRFKEIKTSLRELRRGLNEVIAPYNSNSNADTNHSRHE
EEAPCEFCGTSVLLEDLVLHQTGCRPDLAQYRSPPPSPGPRPPAEPPAPQSFPLAGSPRA
SHTLRVLYQIVARASRMPPPGD