| New model in OGS2.0 | DPOGS206838 |
|---|---|
| Genomic Position | scaffold1:- 2868399-2872872 |
| See gene structure | |
| CDS Length | 1617 |
| Paired RNAseq reads | 57 |
| Single RNAseq reads | 177 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012785 (9e-65) |
| Best Drosophila hit | ND |
| Best Human hit | selenoprotein O (1e-77) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Saccoglossus kowalevskii] (8e-138) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Saccoglossus kowalevskii] (6e-127) |
| GeneOntology terms | GO:0003674 molecular_function GO:0008150 biological_process GO:0009507 chloroplast |
| InterPro families | IPR003846 Uncharacterised protein family UPF0061 |
| Orthology group | MCL21931 |
Nucleotide sequence:
ATGGAAGGGGAATCTACATCACTAAAAGAAAATTTAAATGAGTGGAGATTTAGTCTGCAT
CCGAAATATATATTGCTTCCTATTGATGAGAACCACGACCAAGTTAAAAATAATGTTAAA
AACGTCATATACTCCGAGGTAACTCCGCATCCGTTAGAAAAAAATTTACGTCTCGTATGT
TTTTCTGAAGATGCACTTACAAATATTCTTGATATGTCTCCTGAGATAGTAAATACGGGT
GAATTTCTCGAATTTGTTGGAGGAAGAAGGTTGCCTTGTGGATCTTTGCCTGTTGCACAT
AGGTATGGCGGTCATCAATATGGACTTTGGGTGGGTCAACTTGGTGACGGTAGAGCTCAT
TTAATTGGTGAATACGTGAATAGATTATGCGAACGTTGGCAAGTACAGCTGAAGGGCTCG
GGTTTAACGCCTTATTCGAGATTGTATGATGGTCGTTGTGTGCTGCGTGCCGCCATCAGG
GAAATGGTTGCCAGTGAGGCAATGTTCCATTTGGGCGTGCCAACTACACGCACTGCTGCA
GTAGTTGCCAGTGATGATACAGTAGTACGTGATTTGTATTATTCGGGAAATCCCCACCGT
GAAAAAACAGCGATTTTGTTAAGATTATCACAGAGTTGGTTTCGATTTGGTTCCTTGGAA
ATATTGGCAAAAGGTGGAGAACTGGCTATTTTGAAGCAATTAACCGACTTTATAATTAAG
GAACACTTTCCTGATATCCATCTCTCAGACGAAAATAGATTTATTCGTTTATTCTCCGAG
ATGGCACACAGATCTCTGGACTTAGTAGCTAAATGGCAAGGTTTAGGATTTACCCACGGT
CTTTTAAATACGGACAATATGAGTATTTTGGGAGTTACCATGGACTATGGTCCGTTTGGA
TTCGTGGATTCTTACGATGGCGGCTTCGTCTCAAATTCATCAGACGGGGAAGGACGTTAC
TCACTGTCAAAACAACCAGATATCGTGGTGTGGAATATAGGCCAGCTGGCGAATGCTCTG
AAACCGCTATTGTCTTCGTCGCAGCAAGTGCACATGACACATATATTGAAGACATTGGAC
ACATATTGCAAGAATAAAATATTGGAGACATTCTTGATGAAAATTGGTCTGAAGAAGGAG
CGCTGGGGTGACGAAGAATTGGTAGAGAAGTTGCTAGATATGATGCAGCATACTGGAGCG
GATTTCACCACCACCTTCAGGCAGCTATCTGAACTAGAACCTCACGAAATGGTTACTGGA
TCGAAGTTGGAAGAGAAATGGTCGTTAAAACGACTATCTTCTCATTCGTCGTGGGGGTGC
TGGTTGGATCAATATCGCGAGAGATTGGACAAAGAGTCTGTTGACAGCAGCAGCTCTTGC
GTGTTTTCTGTGGAACGCGTTCGTCGGATGCGCCTGGTCAACCCCGCGTACGTTCCGCGT
ACTTGGCTTATACAAGAAGCCATACAGGATGCGGAAAGAGACGATTTCACGAAGTTACGG
TTTCTGCTGCAAGTCATTCAAAACCCGTACGAAGTGCAGCCAGAGGCGGAGGCCCGAGGT
TTTTCGAACCAGCCTCCACAGTGGGCTTACGCCCTGAAAATAAGCTGTTCTAGTTGA
Protein sequence:
MEGESTSLKENLNEWRFSLHPKYILLPIDENHDQVKNNVKNVIYSEVTPHPLEKNLRLVC
FSEDALTNILDMSPEIVNTGEFLEFVGGRRLPCGSLPVAHRYGGHQYGLWVGQLGDGRAH
LIGEYVNRLCERWQVQLKGSGLTPYSRLYDGRCVLRAAIREMVASEAMFHLGVPTTRTAA
VVASDDTVVRDLYYSGNPHREKTAILLRLSQSWFRFGSLEILAKGGELAILKQLTDFIIK
EHFPDIHLSDENRFIRLFSEMAHRSLDLVAKWQGLGFTHGLLNTDNMSILGVTMDYGPFG
FVDSYDGGFVSNSSDGEGRYSLSKQPDIVVWNIGQLANALKPLLSSSQQVHMTHILKTLD
TYCKNKILETFLMKIGLKKERWGDEELVEKLLDMMQHTGADFTTTFRQLSELEPHEMVTG
SKLEEKWSLKRLSSHSSWGCWLDQYRERLDKESVDSSSSCVFSVERVRRMRLVNPAYVPR
TWLIQEAIQDAERDDFTKLRFLLQVIQNPYEVQPEAEARGFSNQPPQWAYALKISCSS