| New model in OGS2.0 | DPOGS206840 |
|---|---|
| Genomic Position | scaffold1:- 2786513-2789081 |
| See gene structure | |
| CDS Length | 1245 |
| Paired RNAseq reads | 376 |
| Single RNAseq reads | 955 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013072 (1e-146) |
| Best Drosophila hit | CG5706 (2e-22) |
| Best Human hit | leucine-rich repeat-containing protein 47 (1e-52) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Nasonia vitripennis] (1e-103) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Nasonia vitripennis] (1e-98) |
| GeneOntology terms | GO:0004826 phenylalanine-tRNA ligase activity GO:0003723 RNA binding GO:0005515 protein binding GO:0003674 molecular_function GO:0008150 biological_process GO:0005575 cellular_component GO:0006412 translation |
| InterPro families | IPR001611 Leucine-rich repeat IPR003591 Leucine-rich repeat, typical subtype IPR005146 B3/B4 tRNA-binding domain |
| Orthology group | MCL15073 |
Nucleotide sequence:
ATGAAAGAGCTGTCCAGCATAAATTTTAGTTCAAATAAAATCGATCACATGCCAGCCTTT
GGTGATTTTCCTAACTTAATCTCGATAGATCTATCGAACAATAAATTAACGGACTTTTTG
AATACCGAACAGGCAAACCTGCCTCATTTAACAGACTTAAAGATTAAGGGAAACGAAATA
GAAACACTTCCAGGTTATATAGCAAGTACCATGCCTTCACTAAAAAATTTCGATATTGGG
GAAAATAAATTGAAAACACTCCCTGGAGAAATAGCTGGAATGGCAAAGTTGAAAGAATTG
AATCTAAAAGGTAACAAGCTTTCTGATAAGCGTCTCATGAAGCTAGTAGACCAGTGTCGC
ACAAAACAAATTGTCGACTACATTAGAGAGCATTGTCCTACATCAGACAGTAACCAAGCT
ACAAGCAAGGGTAAAGGGAAGAAAGCCAAGAAACAAGATGAAATCCTACCAGACAATGCA
TCTGAACTCAGTCACACTCTGAAAATTATGCACCTAGACGATGATACATTGAAAATAAAA
ATTATAGAACAAGAAGTCTGGAACATTCGCCCCTACATACTCAGCTGTATAGTGTATGGG
TTGAACTTTGATGAGGCACTCTTCAAGAAATTCCTGCAAATGCAAAATAAATTACATGAC
ACTGTGTGTGACAAACGGAATGTAGCCACGCTGGCTACGCATGACATGAGTAAAATACCT
CCAGGTGACCTTGTATACACAGCCAAAACACCATCGGAATTAAAACTGATTCCTTTAAAT
CGAACAAAACATTTTACGGGTGAACAATTGTTCCAGCAATTGACAAACGAAGCGGATGCA
CTGAGGAAGGAAAAGAAAAGAAATGTTTATTCAGGAATACATAAATACCTGTACTTACTT
GAAGGCAAACCCAAATATCCATGCTTAGAAGATGCAACAAAGAGAGTGATCAGCTTTGCC
CCAATCACCAACTCTGAGGAAACTAAAATGACGGTAGACAGCAAATCAATGTTAGTGGAA
GTGACATCGCATTCATCGCTCGGTGCTTGCAAAACTGTCATGGATAAACTCCTACAAGAA
TGTTTGATGCTTGGCATTGGGGAAGGAGACGGTGACTTCCACACATTGACTGTGCAACAG
GTCAAAATTGTGGATCCCGAGGGTAATCTGAAGAGCATCTACCCATCAAGAACAGACTGT
GTTTACGATAGCACCATCAAAGTTTACAGGATTCCCAAGAAATAA
Protein sequence:
MKELSSINFSSNKIDHMPAFGDFPNLISIDLSNNKLTDFLNTEQANLPHLTDLKIKGNEI
ETLPGYIASTMPSLKNFDIGENKLKTLPGEIAGMAKLKELNLKGNKLSDKRLMKLVDQCR
TKQIVDYIREHCPTSDSNQATSKGKGKKAKKQDEILPDNASELSHTLKIMHLDDDTLKIK
IIEQEVWNIRPYILSCIVYGLNFDEALFKKFLQMQNKLHDTVCDKRNVATLATHDMSKIP
PGDLVYTAKTPSELKLIPLNRTKHFTGEQLFQQLTNEADALRKEKKRNVYSGIHKYLYLL
EGKPKYPCLEDATKRVISFAPITNSEETKMTVDSKSMLVEVTSHSSLGACKTVMDKLLQE
CLMLGIGEGDGDFHTLTVQQVKIVDPEGNLKSIYPSRTDCVYDSTIKVYRIPKK