| New model in OGS2.0 | DPOGS206844 |
|---|---|
| Genomic Position | scaffold1:- 2672059-2672925 |
| See gene structure | |
| CDS Length | 867 |
| Paired RNAseq reads | 162 |
| Single RNAseq reads | 450 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012574 (5e-51) |
| Best Drosophila hit | CG7675, isoform C (8e-52) |
| Best Human hit | retinol dehydrogenase 14 (2e-47) |
| Best NR hit (blastp) | PREDICTED: similar to RDH13 [Strongylocentrotus purpuratus] (7e-65) |
| Best NR hit (blastx) | GH21883 [Drosophila grimshawi] (3e-61) |
| GeneOntology terms | GO:0016614 oxidoreductase activity, acting on CH-OH group of donors GO:0005488 binding GO:0055114 oxidation reduction |
| InterPro families | IPR016040 NAD(P)-binding domain IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR |
| Orthology group | ND |
Nucleotide sequence:
ATGAGTGGAAAAGTGGTTGTGGTGACCGGAGCTAGCGGTGGAATCGGCTTCGAGACGGCG
CTAGAGCTGGCGAGGAGGGGAGCCAAGGTTATCGTAGCGTGCAGAAACCATGAGAAGGGT
CAGACAGCTGTTCGCAGAATCATCAAGAGGACCAATAATAATAGGATACATTACATACAT
TTAGATCTCACATCTTTACAATCAATAAGAAACTTTGTAGACCAGTTCAAGTCAAGGGAA
GCTAAGCTAGATGTTCTCATCAACAACGCCGGCGCTATACTGACATCCAGGGAGAGAACT
GAAGACGGTATCCTAAAGGATTTGCAGATCAATTACTTCGGACCGTTTCTATTGACCGTA
CTACTGGTGCCGATGCTGAAAAAGGCATCGCCTAGTCGTGTAGTCATCGTGTCGTCCTCG
TGGCATAAATTCGGTACAGTCAATGAACTGAACAGCGATAGACATGGTTATATACAGGCG
TACGCTAATAGCAAGTTGTGTAATATTATGTTTTGTAAGGAGCTGTCCAAGCGTCTGGAG
GGCACGGGAGTGGTTGTCAACAGTTTAAACCCCGGCCTCGTGAACACATCTTTGTACAGA
AGCTCAACAGCCCTGGAGAAGTTGAGGAGTTTGATGCTATACGCTTTCTTTAAAACACCA
GAAGAGGGCGCGCAGACGTCTTTATATTTAGCTGTCGATATCGAATGCGATCAGGTTACC
GGAAAGTACTTCGAAGACTGCAAGGAAGCCCGACCGTCCTATAAGACTGATGATGAAGAG
ACAAGAGACAAGTTGTGGGAATTATCAAAGGATCTCGTAAAATTGACACCGGAGGAAATC
AGTCAATGTTTTAATGATACCACATGA
Protein sequence:
MSGKVVVVTGASGGIGFETALELARRGAKVIVACRNHEKGQTAVRRIIKRTNNNRIHYIH
LDLTSLQSIRNFVDQFKSREAKLDVLINNAGAILTSRERTEDGILKDLQINYFGPFLLTV
LLVPMLKKASPSRVVIVSSSWHKFGTVNELNSDRHGYIQAYANSKLCNIMFCKELSKRLE
GTGVVVNSLNPGLVNTSLYRSSTALEKLRSLMLYAFFKTPEEGAQTSLYLAVDIECDQVT
GKYFEDCKEARPSYKTDDEETRDKLWELSKDLVKLTPEEISQCFNDTT