New model in OGS2.0 | DPOGS206848  |
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Genomic Position | scaffold1:- 2592598-2604732 |
See gene structure | |
CDS Length | 906 |
Paired RNAseq reads   | 440 |
Single RNAseq reads   | 1212 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012801 (3e-45) |
Best Drosophila hit   | CG2663, isoform B (2e-20) |
Best Human hit | alpha-tocopherol transfer protein-like (5e-09) |
Best NR hit (blastp)   | PREDICTED: similar to phosphatidylinositol transfer protein [Acyrthosiphon pisum] (3e-55) |
Best NR hit (blastx)   | PREDICTED: similar to phosphatidylinositol transfer protein [Acyrthosiphon pisum] (2e-53) |
GeneOntology terms    | GO:0008431 vitamin E binding GO:0005215 transporter activity GO:0005622 intracellular GO:0006810 transport |
InterPro families    | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR011074 Phosphatidylinositol transfer protein-like, N-terminal |
Orthology group | MCL17240 |
Nucleotide sequence:
ATGGCTGTGGAACTAGAATATGATTATGATACGGCAATAGCTGCCATGGATAAATTTTGC
CAAGAAGATTTTAATTCCTTGAAAGAGTGGACGAAAAAATTAGACAAGTCAAAATATGTT
CCTAAAGACCTTACGGATAAACAGTTGTTGTTATTTTATAACGCTTGCTATGGAGATATA
GAGAGGAGTAAAACGTGTATAGAAAGATATTACAATCTAAGAAAAAATACTCCAGAAATC
TTCGACAATAGATGTTTAAGTTCGGATGAGCTGCAACCTTCTGTAGAAGCCCTAGAGTTC
AGCGTACTGCCAGAGAAATCTCACGATGGTTACGACTTGATCTACCACCGACTCCACTAC
ACCGAACCCTCTAAATACCACTTCGAGCCTGGCTGCAAGCTGCTCTTCATGACCGTCGAT
GCTTGTCTACACAAGAGAGGTCCACAGCCAGGTTACATTTTTCTCTTCGACATGCAAGGA
GTTAAACTCGGCCACCTCACCAGAGTTAGTCTCTCGTCTCTACGTAAATTCTTCCAATAC
GTACAGGAAGCGATGCCGGTGAGAATGAGGGCGATACACGTCTTCAACACGGAACCAATC
CTGGACAAGCTGCTCTTACTCATCAGACCTTTCATGGATAAAAAGTTCTTTGATATGATA
AAGTTCCATCACAAGAACGAAGACTTGGAGAATTTCTATCAGACTGTTATACCGCGTTCG
GCGCTGCCGCCGCTCCACGGTGGTACACTTCCAGATACACAAACCCTTCATAAAAAATGT
ATGCAGACGTTGAAAGCTCTAGAGCCGTACTTCAAAGCTGAAGAGGAACAGAGAATCAAC
GCTCTGCCAGACAAAAAACGTGATAAGGCCTTGGAGAGGTCATTCAAACATCTCGACATA
GATTAA
Protein sequence:
MAVELEYDYDTAIAAMDKFCQEDFNSLKEWTKKLDKSKYVPKDLTDKQLLLFYNACYGDI
ERSKTCIERYYNLRKNTPEIFDNRCLSSDELQPSVEALEFSVLPEKSHDGYDLIYHRLHY
TEPSKYHFEPGCKLLFMTVDACLHKRGPQPGYIFLFDMQGVKLGHLTRVSLSSLRKFFQY
VQEAMPVRMRAIHVFNTEPILDKLLLLIRPFMDKKFFDMIKFHHKNEDLENFYQTVIPRS
ALPPLHGGTLPDTQTLHKKCMQTLKALEPYFKAEEEQRINALPDKKRDKALERSFKHLDI
D