| New model in OGS2.0 | DPOGS206862 |
|---|---|
| Genomic Position | scaffold1:- 2338194-2341170 |
| See gene structure | |
| CDS Length | 645 |
| Paired RNAseq reads | 425 |
| Single RNAseq reads | 902 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013042 (2e-61) |
| Best Drosophila hit | CG42339, isoform B (9e-37) |
| Best Human hit | RPE-spondin precursor (5e-16) |
| Best NR hit (blastp) | PREDICTED: similar to IP06836p [Tribolium castaneum] (2e-60) |
| Best NR hit (blastx) | PREDICTED: similar to IP06836p [Tribolium castaneum] (2e-63) |
| GeneOntology terms | GO:0006955 immune response GO:0005044 scavenger receptor activity GO:0030247 polysaccharide binding |
| InterPro families | IPR000884 Thrombospondin, type 1 repeat |
| Orthology group | MCL10462 |
Nucleotide sequence:
ATGAAACTTGGCGACTGCTGTCCTGACTTCAGGGAAACTTGCGGAGTATTGGATTGCGTG
GTATCTGGTTGGGGAGAGTGGTCAGAATGTGACAATGAGTGTGGTTCGGGCAGCATGATG
CGGAGTCGTCGTGTAGTGCAGGCACCGGCTCGCGGTGGAAAACATTGCCCGACATTGGTA
CAAAGAAGGGCTTGTCAATCCCACCACGGTTGCACTGAAGAGAGTGACATACCATTACGC
GAGGAATCGGCGATGATTCTACCTGGCTCACTGTCTATAAGTCGTCATTCCGATGAAAGT
GTTGATATCAGGAAGAATTTGCGTCTACGCAATCCTGATGACCCGGAATCAAACTCTCAT
AGGGAGTACTGCGTTCAATATGAGGTTACGAAAGTATCCAAGGCCTGCCACACTGACTCC
GATTACAAAGCTCTACGAGAGGGTGCTACCGTATGTGTCATGTGCGAGACGGCAGCTCTA
AGACGTGATCTCAAATGGCGTTGCGGCGGCCACGGCGTATCTGGACACGCAACACGTTTT
TACGCTCTCGTGGCTCCACACTGCCACGGAAAATGGATCCGCGCATCAAACAATGCGGAT
AAGAACTCCGGCTGTTGTCTCAAACCGGACTTCATCTTCGTCTAG
Protein sequence:
MKLGDCCPDFRETCGVLDCVVSGWGEWSECDNECGSGSMMRSRRVVQAPARGGKHCPTLV
QRRACQSHHGCTEESDIPLREESAMILPGSLSISRHSDESVDIRKNLRLRNPDDPESNSH
REYCVQYEVTKVSKACHTDSDYKALREGATVCVMCETAALRRDLKWRCGGHGVSGHATRF
YALVAPHCHGKWIRASNNADKNSGCCLKPDFIFV