| New model in OGS2.0 | DPOGS206863 |
|---|---|
| Genomic Position | scaffold1:- 2158607-2165097 |
| See gene structure | |
| CDS Length | 2766 |
| Paired RNAseq reads | 1151 |
| Single RNAseq reads | 2609 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012814 (1e-131) |
| Best Drosophila hit | suppressor of white-apricot, isoform A (5e-40) |
| Best Human hit | splicing factor, arginine/serine-rich 8 (6e-27) |
| Best NR hit (blastp) | PREDICTED: similar to GA15714-PA [Nasonia vitripennis] (1e-63) |
| Best NR hit (blastx) | PREDICTED: similar to GA15714-PA [Nasonia vitripennis] (5e-72) |
| GeneOntology terms | GO:0000398 nuclear mRNA splicing, via spliceosome GO:0005634 nucleus GO:0005681 spliceosomal complex GO:0003723 RNA binding GO:0006396 RNA processing |
| InterPro families | IPR000061 SWAP/Surp IPR019147 Splicing factor, suppressor of white apricot |
| Orthology group | MCL15828 |
Nucleotide sequence:
ATGGGGGATGAAACTTTGAAAATCGACAGGTATGACGCAAGAGGGGCCCTCCATGATTTG
GTGTCCTTAGAAGCTCCACCTGGTGGCTTCGACTGGCGTGTGGAGCTTTCCAGATCTGAA
CAGGATGTGGAACAGCTCTGTGATGAGGAGAGATACCGGGCCCTACATACTGATGAAGAT
GAGGAAGAAATGTATAAGGAGGAAGAGCTTAAACGGCTCCATGCAGCAGGTTATGGTCAA
GTCGGCTTCAACTATGACGCTCCAGCTGAAACACCTCCTGAACCTCCAGTAGAAATTGAA
GAGCCCTTTGAACCTACAGCTTCATTTAAAGAACTGCTGCCTTCAAATACAGAATTTCCT
CCAACACAGAAGCAAAATGCAATTATTGAAAAGACAGCCAAGTTTATAGCACATCAAGGT
ACCCAAATGGAAATTCTTATTAAGGCCAAACAGGGTGACAATCCCCAATTTCAATTTCTC
AACAAAGATTCATCACTACATCCCTACTACACGACCCTTATAGCATTGGTCAAAGCTGGA
AAGTGGCCGGAGAAGGCAGAGGTTGTTGAAGAAAAACATGAAACAAATGAGGAGTACCTT
CATCCAAGCTTAGCATCAACTGTTATAGAATCGGCTCCTTCAATACCGAGCATTCACTAC
AAGCCATCTGCAGATTGTGACTATACTTTACTGATATCAAAAATGAGGGGCGAGACATTG
GATGAGTACTCCGACCTGGCGCCTGGCGAGGTGGCTCCCCCGGGAACTGAACCTGTGCTA
CCAAGGGCTGATATCATGAAGGCACCGGTCATGTACAATAGAGGAGAACCAGTTCCACCG
ATTCCTCAAACTGTGCAACATCATCAGTATGCAGCGTACTACACACAGTATATGGCTCAT
CTAACACAAGCACAGACACAAGCACACACGCCACAGACGACAGTTGAAAAACCAGCACCG
ACCATATCTCCAACGGAATCCACCGGTTTAAGTCTTATGAAGAACTACAACACGGACAGT
GAAAGCGAAGAATCAGAATTAGAAGAGAGTTCTAAGCAAGGAAGCAAAGACAATGTGTTA
GTTCCACCGAACGATATTCATGTGGTCATAGACAAGATGGCGGCATACGTAGCGCGGAAC
GGTGACGAGTTCGAAAAAATTGTTCGGTCTAAAAACGATCCGAGATTCACATTCTTAGAT
GACAGTAATATATATCATCCATACTACAAGAAATTGATGCTTGAGAAAAGAGGTGTCCCA
AATGGAAAGGATAAAAACGAAATTGATAAAGCAATCCCCGTGTCGTTTTCAATAAAGAAA
CATAAAGAACCGGAACCGATTCTCCCGAAGCCAGCACTTCCATACGAGTCGAGCACAGAT
GGTGAGGAAGAAAATAAAGAAGCCGATAAACGTGAAGCACCTAAGGAAGTGCCAGTCACT
AATATACCGCAGACACATCTCACTAACAACAGTAACAGTATTCCGCCTATTGTTGTATAC
AAAATGGAAGCTGTACAGGCCAACAATCTGCCTTTAGTGAAAACATATGAACCTTGCAAC
ATTGGCAAAGCAGTTACTGAAGTCAGTGAGAATCCTAAGGAAGCGGTTGTTCCTCAAGTA
GTTGAAAAAATTACAGAAAATGTCTTACAGCCCCCTGCTGAAATTAAAAAGGAGAATTCG
CCGGAAAAAAAAGTTGTCGAACGGGCCAAAGACAAAGATAAGAGTCCCAGGGATAAGAGT
CCTAAAGAAAGGAGTCCTAAAGAAAGGAGTCCTAAAGAAAAGAGTCCTAAAGATAAGAGC
CCTAAAGATAAGAGTCCTAGGGATAAAAGTCCTAGAGACAGGAGCCCTAGAGATAAAAGG
AAATCTAGAGATCGAAAAAAGGATTATAGATCAAGAAATGATAGGGAATCGAGAAGATCC
GATCGGAGAAATGATGACAGAGACAAAGAACGCGAGAGAAAGAGAGACAGAGAGAGTGAC
AGGGATGGAAAAAGAAAGAAATATAAAGACGCCATAGAAACAGAAATTATATCATTAGAA
GATAATTCTGATGAAATGATTGATTTGACCGGCGAGCAATCCGATTCCAGAGGCGAAGAG
ACGGAGGCGGATCGTTGCAAGCAGCAGCAGCGTCGTCGCCGTGCGGCGGAGTTCCTCCGA
CGTGTGTCCTCCTCCCGCACGAGGACTAGCCACGGGACCGACCGCAACCCTCGCCCACCG
ACCGCTACTCTACCGCACTCCTCACTAGCCAGCGCCATGGTTGACACATTAGAATCATTG
TACAAAAAGAAAAACGAGGAAGACGAAAAGAAGAAGCGAAGAGAGAAACGACGGCAACGA
GATAAAAGAGATTATGAAGAAGAATCCGACAGATACAAGAAAAACAAAAGAAGGAAGAAT
AGGTCTTCAGAAGAGGAAGACTCAGATGGACCGGGTTCCAAAAAGAAGAAGAGAAGGAAA
GAGAAAAGCCATTCCTCTAAAAGCCAGAAAAAACCGAGAGACACAGAGATAGGTGAAAAG
CCACAGCAAATTAACATCGATATAACGAACACGCTCAAGGAGCTAAGGAACTCATCCCCC
ACAAAAGAACTAAGATTAAGAGAGGAGAAGCTTTTAATAAAAGATAATTCCGATGGAGAG
AAAAGTATGAAGAGCATAAAGAGAGATAGAGAGTACAGCGAGGGAGAGTGGTCCAGCGAT
AGTAATAATGACTCCGGCTTAAGTGACAACAATGCGGAACAAACCGTAGCTGGGAAATCA
AATTAA
Protein sequence:
MGDETLKIDRYDARGALHDLVSLEAPPGGFDWRVELSRSEQDVEQLCDEERYRALHTDED
EEEMYKEEELKRLHAAGYGQVGFNYDAPAETPPEPPVEIEEPFEPTASFKELLPSNTEFP
PTQKQNAIIEKTAKFIAHQGTQMEILIKAKQGDNPQFQFLNKDSSLHPYYTTLIALVKAG
KWPEKAEVVEEKHETNEEYLHPSLASTVIESAPSIPSIHYKPSADCDYTLLISKMRGETL
DEYSDLAPGEVAPPGTEPVLPRADIMKAPVMYNRGEPVPPIPQTVQHHQYAAYYTQYMAH
LTQAQTQAHTPQTTVEKPAPTISPTESTGLSLMKNYNTDSESEESELEESSKQGSKDNVL
VPPNDIHVVIDKMAAYVARNGDEFEKIVRSKNDPRFTFLDDSNIYHPYYKKLMLEKRGVP
NGKDKNEIDKAIPVSFSIKKHKEPEPILPKPALPYESSTDGEEENKEADKREAPKEVPVT
NIPQTHLTNNSNSIPPIVVYKMEAVQANNLPLVKTYEPCNIGKAVTEVSENPKEAVVPQV
VEKITENVLQPPAEIKKENSPEKKVVERAKDKDKSPRDKSPKERSPKERSPKEKSPKDKS
PKDKSPRDKSPRDRSPRDKRKSRDRKKDYRSRNDRESRRSDRRNDDRDKERERKRDRESD
RDGKRKKYKDAIETEIISLEDNSDEMIDLTGEQSDSRGEETEADRCKQQQRRRRAAEFLR
RVSSSRTRTSHGTDRNPRPPTATLPHSSLASAMVDTLESLYKKKNEEDEKKKRREKRRQR
DKRDYEEESDRYKKNKRRKNRSSEEEDSDGPGSKKKKRRKEKSHSSKSQKKPRDTEIGEK
PQQINIDITNTLKELRNSSPTKELRLREEKLLIKDNSDGEKSMKSIKRDREYSEGEWSSD
SNNDSGLSDNNAEQTVAGKSN