| New model in OGS2.0 | DPOGS206865 |
|---|---|
| Genomic Position | scaffold1:- 2095529-2102378 |
| See gene structure | |
| CDS Length | 1098 |
| Paired RNAseq reads | 310 |
| Single RNAseq reads | 863 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012816 (4e-152) |
| Best Drosophila hit | whacked, isoform B (1e-114) |
| Best Human hit | TBC1 domain family member 10B (3e-93) |
| Best NR hit (blastp) | PREDICTED: similar to gh regulated tbc protein-1 [Nasonia vitripennis] (7e-134) |
| Best NR hit (blastx) | PREDICTED: similar to gh regulated tbc protein-1 [Nasonia vitripennis] (2e-132) |
| GeneOntology terms | GO:0005097 Rab GTPase activator activity GO:0005622 intracellular GO:0032313 regulation of Rab GTPase activity GO:0007430 terminal branching, open tracheal system |
| InterPro families | IPR000195 Rab-GAP/TBC domain |
| Orthology group | MCL11183 |
Nucleotide sequence:
ATGTCCCTACAAAAAAGTGTTAAAAGTGTCGGAGGTGACCAGGATAATACTTCGATATGT
TCTTCAGTGACTACGCAACCCGATAGACATGGCTTTTTTGGCGGAGCCCAATATAGTCCA
GAACCGAAAAGGACTTTATCACCGAGCACAATATTGAAACGAGAACAAAAGTGGTTACGA
ATGCTGAATAACTGGGAGGCGTTTATGAGCAAAAATTATAAAAAGGTCCGCGAGAGGTGT
CGGAAAGGTATCCCGGCGTCCGTTCGACCGAAGGCCTGGTTGTATCTCTGTGGTGGTCAG
CTACTGCTGGAGAAACATCCGGACGAGTATGAGGAGCTGTTGAAAGCGCCCGGGGATCCT
AAATGTATGGAAGATATACGCAAGGATCTGCACAGACAGTTCCCGTACCACGAGATGTTC
ATTAGGGAGGAGGGGCTCGGGCAACAAGAGCTCTTCTGTGTTCTCAAAGCTTACTCGGTG
CTGAACCCTAAAGTTGGTTACTTCCAAGCCCAGGCTCCGGTAGCTGCTTTCCTTCTCATG
CACATGCCGGCCGTCCAGGCATTCTGGTGTCTCGTCAGCATCAGCGACAAATACCTCAGC
GGATATTATAACCCCGGCCTGGAGGTGCTGCAGCGCGATGGTGATATTCTTCACGCTTTA
CTCCGCCGCACAGCGCCCGCCGTCCACCGTCACCTGGTGAAGCACCGCGTGGAACCTGTC
CTGTACGCCACAGAGTGGTTCCTGTGCGCCCTCACAAGGACACTACCCTGGGACAGCCTC
CTCAGGGTCTGGGATTGCTTCCTATGCGAGGGAGTCAAGGTGCTATTCAAGGCCGCGCTG
GTGATTCTAGCGGGAGCGCTAGGTCCGGCCAAGGTCCGTAAGCGAGCCGCCGGGCTCTGC
GAGACCCTCGAGGAGCTGAGACATCCACCGCCCGCGATACTCGGCGAGGACTACCTCATG
TACCACATGCAGAGACTCGGACTCACAGAGGAAGACTTTGAGTTCGAACATCAACGACAA
ACAGCCAAGAGAAGAGCCATGGCCAATAGAAGGTCTGTACATATTTGTTTATTTAACATA
CATAGCTTGCAAATTTAA
Protein sequence:
MSLQKSVKSVGGDQDNTSICSSVTTQPDRHGFFGGAQYSPEPKRTLSPSTILKREQKWLR
MLNNWEAFMSKNYKKVRERCRKGIPASVRPKAWLYLCGGQLLLEKHPDEYEELLKAPGDP
KCMEDIRKDLHRQFPYHEMFIREEGLGQQELFCVLKAYSVLNPKVGYFQAQAPVAAFLLM
HMPAVQAFWCLVSISDKYLSGYYNPGLEVLQRDGDILHALLRRTAPAVHRHLVKHRVEPV
LYATEWFLCALTRTLPWDSLLRVWDCFLCEGVKVLFKAALVILAGALGPAKVRKRAAGLC
ETLEELRHPPPAILGEDYLMYHMQRLGLTEEDFEFEHQRQTAKRRAMANRRSVHICLFNI
HSLQI