| New model in OGS2.0 | DPOGS206872 |
|---|---|
| Genomic Position | scaffold1:- 1908380-1911508 |
| See gene structure | |
| CDS Length | 1392 |
| Paired RNAseq reads | 260 |
| Single RNAseq reads | 727 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013149 (2e-156) |
| Best Drosophila hit | Es2 (3e-61) |
| Best Human hit | protein DGCR14 (6e-54) |
| Best NR hit (blastp) | AGAP001347-PA [Anopheles gambiae str. PEST] (2e-87) |
| Best NR hit (blastx) | AGAP001347-PA [Anopheles gambiae str. PEST] (2e-84) |
| GeneOntology terms | GO:0004757 sepiapterin reductase activity GO:0005634 nucleus GO:0007399 nervous system development GO:0000398 nuclear mRNA splicing, via spliceosome GO:0071013 catalytic step 2 spliceosome |
| InterPro families | IPR019148 Nuclear protein DGCR14 |
| Orthology group | MCL13571 |
Nucleotide sequence:
ATGAAAATACTTAAAAATGAAAGTTCCCTTTTTAAGGTACCTAAAGTACCACCAATTAAG
AGAAAAGTCACGAAAACACATATCTTGGATGAAGAAGATTATGTACAGGGAATAGCACAG
ATCATACAGAGAGATTTCTTCCCAGATTTAGAAAAACTTAAGGCGCAAAATGATTACTTA
GAAGCTTCTGAAAACAAAGACTATGCCAGGCTACGACAAATTGCCAAAAAATACAGTGGG
CATAGACCACCTACAGAACCATATAATTCTCCTGCCACATTTGACACACCAAATGCCGAT
AGACCTTTTTCTCCATCCTCAGCAGAAGCACAATCAATACCTAAAGAAACTGTTGAGACC
TTTAAGGATATAACTGATAAACATACTTTAGATTCCTTCCTCGCGCTACATACAAGTGAA
GACAATGCAAGCTACAATCGCGTTATAGCACTTGAAAACAAGAAGAAAGCAAGTAAAATT
GCTTCCCAGTTGCAGTCAGAGGTCACCTCAGCTATTCAAGCTGACAATGCATTAGCATTG
CCATCTTTGGAGCAACAGGCTAATCAAGAAGAGAGACCTCATGAGCTGGACACATGGAGG
TATCGGGCCAAGAACTACATAATGTATGTGCCGGACGGGGCTGAATCTCAGCTGCCTAGC
CCCAAACCAGAGCTGCAACACCACAACACTAGACTTACAACACAAGTATTTGATTCAGCT
AAGAACAAAGAAGCGATAACTGCTTTGGCAAGAAGTCAGGATTCAGCTATCCAAGGCAAG
ATTGGTGTTGATGGTGTCAGTATAGGCGAGAAGCCGGAGTACAACTTCGTGTCGACTCCA
TCACCTAGACCAGGAGCTGGTCCGGACCAGTCCCCGCTCATGACCTGGGGAGAGATTGAG
GGCACTCCATTCAGGCTGGACGGAGGGGACACGCCTCTACCTGCTGTGGGCGCAGGCATG
GCTTATCGTATGCTGGAGTCGGGCTCCCGCGAGAGGATCGCACTGCAGCTGGCGGAGAGA
GCTGCGAAGCGGAGACGACCAACAACACCAACACATACCATGAAGACGCCTGGGAGTTTC
AGAACCAACACAGAGAGGTTGGCAAGCATGTCGCCAGCGGCAAGGAAATTGGCGGCAAAG
CATTTACTGTCGCCACGCTTGAAATTAACACCCAACGCCATGGGTATATCGCATAAAACA
CCAAAAATAACCCCGTCCCCAGGAACACCGTTGGTGGCAACTCCAAAAACACCATCTTCA
GCTAAAACATCTGAGAATCCATCTCAAACTCCAGAGAGCAGTTCACAGACGGATAAAAAT
CTCACAGATAATCTATTACAGATAAACCTTGCAAAGAGGACAAGGCTAAAAGCACAAGAT
TTCTTCAAATAA
Protein sequence:
MKILKNESSLFKVPKVPPIKRKVTKTHILDEEDYVQGIAQIIQRDFFPDLEKLKAQNDYL
EASENKDYARLRQIAKKYSGHRPPTEPYNSPATFDTPNADRPFSPSSAEAQSIPKETVET
FKDITDKHTLDSFLALHTSEDNASYNRVIALENKKKASKIASQLQSEVTSAIQADNALAL
PSLEQQANQEERPHELDTWRYRAKNYIMYVPDGAESQLPSPKPELQHHNTRLTTQVFDSA
KNKEAITALARSQDSAIQGKIGVDGVSIGEKPEYNFVSTPSPRPGAGPDQSPLMTWGEIE
GTPFRLDGGDTPLPAVGAGMAYRMLESGSRERIALQLAERAAKRRRPTTPTHTMKTPGSF
RTNTERLASMSPAARKLAAKHLLSPRLKLTPNAMGISHKTPKITPSPGTPLVATPKTPSS
AKTSENPSQTPESSSQTDKNLTDNLLQINLAKRTRLKAQDFFK