DPGLEAN15444 in OGS1.0

New model in OGS2.0DPOGS206874 
Genomic Positionscaffold1:- 1887133-1888436
See gene structure
CDS Length1161
Paired RNAseq reads  70
Single RNAseq reads  211
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA013150 (4e-144)
Best Drosophila hit  Rad9, isoform B (1e-30)
Best Human hitcell cycle checkpoint control protein RAD9A (2e-44)
Best NR hit (blastp)  PREDICTED: similar to RAD9 homolog A (S. pombe) [Ciona intestinalis] (5e-57)
Best NR hit (blastx)  PREDICTED: similar to RAD9 homolog A (S. pombe) [Ciona intestinalis] (3e-56)
GeneOntology terms











  
GO:0016787 hydrolase activity
GO:0004518 nuclease activity
GO:0004527 exonuclease activity
GO:0006974 response to DNA damage stimulus
GO:0008853 exodeoxyribonuclease III activity
GO:0005634 nucleus
GO:0000075 cell cycle checkpoint
GO:0000077 DNA damage checkpoint
GO:0009314 response to radiation
GO:0005737 cytoplasm
GO:0005515 protein binding
GO:0006281 DNA repair
GO:0043065 positive regulation of apoptosis
InterPro families  IPR007268 Rad9
Orthology groupMCL13639

Nucleotide sequence:

ATGAAATGTCACGTACCTGGTCCGAATGTTAAAGTTTTAGCAAGAACTGTTCATGCTTTA
GCAAGATTTGGTGATGAATTGTATTTGGAATCCCTCCCAGATTGTATACTATTGAGAACA
CTCAATGCCTCCGAAAGCGCCTATGCAATGGTTAAATTAAACAAAAATTTCTTTTCGCAT
TTTAATTATAATTATTATTCTATAGAAAATGATGGATTAAAATGTAAAATTTCCATGAAA
TCTGCATTAAATGCTTTTAAATCCCCTGCACATATGGACAAACAGGTTGAGAATCTTGAG
ATTAAACTTGATCCTCACTCTTCAAAATTAATATTTCAACTCAAATGTAAGCATGGTATT
GTTAAGACCCATTATGTGTCAATATTGGATTGCAAAGCCATGCAAGCAATTTACACAAAA
GATTTAGTGCCTAACAGAATAACATCATCTCAAAGGCTGTTCTCAGAAGCTATAGGAAAT
TTTCAATGTTCAGATGATCAAGTAACGCTAGAGGTGACAAGTGAATCACTTATAATTAAA
AATTTTGGCGATACCCCTACAGACCTTTCAAGGATTATTAGAAGTCAAGTCACAATTAAA
CCGTTTGAGTTCAGCAGTTATACTATTGGGACGGACACCAATATTACATTTACAATGAAA
GAATTCAGAGCATTGTTAGGCTTTGCTGAAGGCTTAAATCTGCCCGTGCAACTACATTTT
GAGATTACCGGTAAACCTGCAGTATTTATAGTACATAATGGTACTACTATTGAGGCACAT
TTTGTATTAGCTACCTCAAAACCTGATATAGCAACTCAATATACATCTCAACAAACAACA
AATTCAGAAAGAAAAAGGAAAGATGACTCAAATGATAACAATATCTCAGCTAAAAAGGCA
CATCTAGAAGATCTATCGAATCAGTTTCAAGAAGATTCAAATTTGTTTAATTATATACCA
AATAATATATCACAGAATGTGATTGAAAATATAAATAATTTAGAAAAGGCAGATTCCATG
GATACAAACCGTGATAACATTCCAGCATCGCCGACGTCCAAAATGAAAATAGCATCAGTA
TTTAAAAGGTGCTTTGAGAGCACTTTTGACCCTAGGATAATTCATGGTGTAGTGTTAGCT
GAGAACTCTGATAGTGACTAA

Protein sequence:

MKCHVPGPNVKVLARTVHALARFGDELYLESLPDCILLRTLNASESAYAMVKLNKNFFSH
FNYNYYSIENDGLKCKISMKSALNAFKSPAHMDKQVENLEIKLDPHSSKLIFQLKCKHGI
VKTHYVSILDCKAMQAIYTKDLVPNRITSSQRLFSEAIGNFQCSDDQVTLEVTSESLIIK
NFGDTPTDLSRIIRSQVTIKPFEFSSYTIGTDTNITFTMKEFRALLGFAEGLNLPVQLHF
EITGKPAVFIVHNGTTIEAHFVLATSKPDIATQYTSQQTTNSERKRKDDSNDNNISAKKA
HLEDLSNQFQEDSNLFNYIPNNISQNVIENINNLEKADSMDTNRDNIPASPTSKMKIASV
FKRCFESTFDPRIIHGVVLAENSDSD