| New model in OGS2.0 | DPOGS206898 |
|---|---|
| Genomic Position | scaffold1:- 1386462-1394787 |
| See gene structure | |
| CDS Length | 3474 |
| Paired RNAseq reads | 285 |
| Single RNAseq reads | 595 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012855 (5e-95) |
| Best Drosophila hit | CG2990, isoform B (1e-162) |
| Best Human hit | DNA2-like helicase (3e-122) |
| Best NR hit (blastp) | PREDICTED: similar to CG2990-PB [Nasonia vitripennis] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG2990-PB [Nasonia vitripennis] (0.0) |
| GeneOntology terms | GO:0000014 single-stranded DNA specific endodeoxyribonuclease activity GO:0004003 ATP-dependent DNA helicase activity GO:0006260 DNA replication GO:0005524 ATP binding GO:0003677 DNA binding |
| InterPro families | IPR014808 DNA replication factor Dna2 IPR007807 Domain of unknown function DUF699, exodeoxyribonuclease V alpha chain |
| Orthology group | MCL15300 |
Nucleotide sequence:
ATGCAAGAAAGTTCGAGTTCCAAAAAGAAATCAGCTCCAAATAAGCAGCAGACAATCCTA
AATTTCTTTGGAAATGCCTCAGACCTTAATAAAACACGTAATCAAGAAGCCTGTTCGGAA
GGAAAATCTAAGTCACTTAAAAGAAAAGCCCATTCACCCTCAAAAATTCACTTAGACTCA
ATTTCACATAAAGTAACAGGGAAATTTAGTTCCGATAATAATACTACTAAAAAGTTAAGG
ATGGACACAAATACCTTAAACGATTTGAAAGGCAAACATATAGAACATGATGCTATAAAA
GTGAAGTCACCTAAGAAGAAAAATATTTTAAGCTGCAAAAGTGGCTTAAGTTTAAACAAG
GAAAATTTGTCAAATGACCTAAATATATCACAAAATGATTTTAACTCACAACCATCACAT
GATGGTTCCAGCTCAAATGAACAGAGGATTAGTCGTGCTGAAATCGATGATATATTCATA
GACGACTTTGATTTAGAGGATATCAAAGATAATTTGGATTTGACAACCATGCAGAGGTGT
AAGATACTTGATATCATAAAACATCCGCAGTCATTTGAAATCATATTGAAAAATAATGTA
AATAATAGAGGAACTGTTTTCATAGAGGGAAATTGGTTGAACACATACCTGCAAACCGGG
GATATAGTTAGCATTCTGGCATCTCGAGACTCGTCTGGTCGGTTTAGAATAAATAATACG
CAAGGTCTCCTTGTGTTGAGGCCAGACCATTTAATATCTTCAACAAGTGTCGTCTCTGGT
GTGTTCTGTAGACGGAAAGCTGTGTTACAAGAAAGATGGAAGGGAATTGATTCTGCATCA
GTTACTATGACAATTGGTACATTGGTTCACGAAATGGTACAGAGAGCTTTAACTCAGAAA
ATTTCAAATGTGCCACAAATTAAAGTTTTATGTGAAAATATAATTAAGGAATCCATTGAG
ATGTTGTATGATGCTGGGATAACGGAGGCAGATGTGAGAACAAACATGCAGGTGTATTTA
GAACCGCTGGCGGAATTTATGCAGACGTATGTGGTTAATGATAAAATGATTGACTCAAAG
AAATATCAGTGGAAAGGTAAAGTAGAGAAAGTTTTAGACATAGAAGAGAATGTTTGCTGT
CCTCAGATGGGTTTGAAAGGTAAAATTGATGCAACACTCAAAGTCACGATTCACAATAGA
AAAGACAAAACCACAACAGTACCATTGGAGTTAAAAAGCGGTCGAGCAAGTGTTTCCGCA
GAGCATACAGGACAGCTAGTATTATATGGTATGATGATGAGTGTCCTCGAAGGGAAGGAT
CCGGCCAGGGGGGACCAGAGGGGCCTGTTGTTGTACCTAAAGGACAAGATAAACATCACT
GAAGTTAATTGTGATTATCCGGAGAGACGAGACCTGGTGATGCTTCGTAATGAGCTCGTC
CAACATCTAGCAGCAGGACCGAATGATACGTCTCAAGACGAGTTAACGGACATCGAAGAT
TTGGGGAAGTACCACCAAAGTTTGCCAGAACCGGTGAATCATCACTCTGCCTGCTCCAAA
TGTGCATATCTCACTCTGTGTTCATTACATTTGTGGCATACAAATGGAACTACAGTATCA
AGTGGCCACCCTTTAAGCAAACTCAAAAGTACAGCCCTGGGACACCTATCCTCTGAACAT
ATACAGTACTTCCTTAAATGGGCGAGCTTACTTCGTGTAGAGGAGAAAATGCAGCTGATG
AATTCACCAATACACGCCCTGTGGACTGATAGCACTGATATTCGATCTAAACGCGGAAGT
TGTGCTCCGAATTTAACTCTGAGTCGTGTTTCAAGTTCCAACGGCAGATACTTACATGTC
TTCATTAGAAACGGAACAAAAACAGAGACGCTCAGTGGTACGCAGTATATTAAAGGACCT
CAAGCAGGTGATTTTTCTATAGTGAGCATAGATAATAGACCCTGGGTTGCAGCCGGAGCG
GTTACATTAAGCGATTCCAAAGAATTGCAAATATTATTGGACAGAGACCTATCACTTCGT
CTGTCAAGTAACACTAAATACCACATCGACATCTACGAAAGTTACGCTACGACTGTACAA
AACCTAACTAACCTCGGTCTGCTTATAGAAGACACCCACCAAGCTTCGAAATTAAGAAAA
TTAATAATAGATAAAGAAAGTCCAACGTTCACACAGAAGCTGCCGCCCCGTGTACACAAG
CTGAGTAAGGAGTTACTCGTCACACTGAACGAGGAACAACAGGCAGCAGTACTGAGAGTG
TTGGAGTGCGATGATTATGTTCTTTTGCAAGGGTTACCTGGCACTGGGAAGACTCAAACT
CTGTGTGCACTGATTCAACTGCTGTGTTCTTTGGGTATGCGTGTGTTGGTCACCGCTCAC
ACACATTCAGCCGTCGATACACTTCTTAGCAGACTACCTTCATCTCTAAAAGTACTGCGT
GTTGGTACTTCGTCGCGAGTATCGGTTTCTGCGGCGGTCAAAGAGTGCACCACAGTGGAA
CAGTTGACCAACCTTTATAACTCAGTGCAAGTGGTAGGAGTCACATGTCTCGGAGCATCT
CACGCGTTGCTGTCGAAGAATACATTCGACTTTTGTATTGTGGATGAAGCGACACAAGTA
CTACAAAGCACAGTCCTCCGTCCGTTGTTTGCTGCGAATAAATTCGTGTTAGTTGGAGAC
CCCGAACAACTACCGCCAGTCGTCAGGAGTAGAGATGCTAAGTTTCTAGGAATGGAGGTG
AGCTTATTCCATAGCCTGATGAAGGATAGAACAACGTGCACTCTAAGCCTCCAATACAGA
ATGAACCAACCTTTAGCAGACCTCGCCAATAAAATTGCGTACAGCAATAGACTTAAATGT
GCCAATGAAACTGTAGCAAAGGCAGCACTTAATATAAATAAAATGAAACTGTCAGAAAGC
TCTTCGGATCAATGGATTACGACTGTGTGCAGTCCGGAACCCGAAGATGCGGCCGTTTTC
CTTAATACAAAGATGGAATTATCTGAAGACGCTTCTAAGACTTTGAACAATAAAGACGAA
GCTGTGGTTGTGCTAGCTGTGATTAAAATTTTAAAACAGGCGGGTATATCAGCGTCAGAT
ATAGGGGTGATAGCTCCGTACCGTGATCAGGTCACTTTGCTGAAACGCGTCCTGGACGGT
ACACAAGTCGAAGCCAGTACTGTAGATCAGTTCCAAGGCAGAGATAAAAGTGTCATAATA
TACTCTTGTACAAGAAAAGATGATAATTTAAGAAAAGTCAAGGATAACGAAGTCCTGAAC
GACAAACGTCGTCTGGCGGTTAGCGTGACGCGTGCGAAACACAAGTTTATTGTGATCGGT
AACATTCGCGCATTGAAAAGATACACTACGATAATGAAACTAGAAGAGGCTTGTAAGACT
GTTGATTTGGATGAAGAGGTTGTTACAAACCTGAATAATAAATATGGGTTCTGA
Protein sequence:
MQESSSSKKKSAPNKQQTILNFFGNASDLNKTRNQEACSEGKSKSLKRKAHSPSKIHLDS
ISHKVTGKFSSDNNTTKKLRMDTNTLNDLKGKHIEHDAIKVKSPKKKNILSCKSGLSLNK
ENLSNDLNISQNDFNSQPSHDGSSSNEQRISRAEIDDIFIDDFDLEDIKDNLDLTTMQRC
KILDIIKHPQSFEIILKNNVNNRGTVFIEGNWLNTYLQTGDIVSILASRDSSGRFRINNT
QGLLVLRPDHLISSTSVVSGVFCRRKAVLQERWKGIDSASVTMTIGTLVHEMVQRALTQK
ISNVPQIKVLCENIIKESIEMLYDAGITEADVRTNMQVYLEPLAEFMQTYVVNDKMIDSK
KYQWKGKVEKVLDIEENVCCPQMGLKGKIDATLKVTIHNRKDKTTTVPLELKSGRASVSA
EHTGQLVLYGMMMSVLEGKDPARGDQRGLLLYLKDKINITEVNCDYPERRDLVMLRNELV
QHLAAGPNDTSQDELTDIEDLGKYHQSLPEPVNHHSACSKCAYLTLCSLHLWHTNGTTVS
SGHPLSKLKSTALGHLSSEHIQYFLKWASLLRVEEKMQLMNSPIHALWTDSTDIRSKRGS
CAPNLTLSRVSSSNGRYLHVFIRNGTKTETLSGTQYIKGPQAGDFSIVSIDNRPWVAAGA
VTLSDSKELQILLDRDLSLRLSSNTKYHIDIYESYATTVQNLTNLGLLIEDTHQASKLRK
LIIDKESPTFTQKLPPRVHKLSKELLVTLNEEQQAAVLRVLECDDYVLLQGLPGTGKTQT
LCALIQLLCSLGMRVLVTAHTHSAVDTLLSRLPSSLKVLRVGTSSRVSVSAAVKECTTVE
QLTNLYNSVQVVGVTCLGASHALLSKNTFDFCIVDEATQVLQSTVLRPLFAANKFVLVGD
PEQLPPVVRSRDAKFLGMEVSLFHSLMKDRTTCTLSLQYRMNQPLADLANKIAYSNRLKC
ANETVAKAALNINKMKLSESSSDQWITTVCSPEPEDAAVFLNTKMELSEDASKTLNNKDE
AVVVLAVIKILKQAGISASDIGVIAPYRDQVTLLKRVLDGTQVEASTVDQFQGRDKSVII
YSCTRKDDNLRKVKDNEVLNDKRRLAVSVTRAKHKFIVIGNIRALKRYTTIMKLEEACKT
VDLDEEVVTNLNNKYGF