| New model in OGS2.0 | DPOGS206905 |
|---|---|
| Genomic Position | scaffold1:- 1287950-1290200 |
| See gene structure | |
| CDS Length | 825 |
| Paired RNAseq reads | 373 |
| Single RNAseq reads | 1899 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012859 (1e-73) |
| Best Drosophila hit | nipsnap, isoform A (3e-105) |
| Best Human hit | protein NipSnap homolog 2 (3e-60) |
| Best NR hit (blastp) | NIPSNAP protein [Bombyx mori] (2e-131) |
| Best NR hit (blastx) | NIPSNAP protein [Bombyx mori] (6e-131) |
| GeneOntology terms | GO:0005575 cellular_component GO:0008150 biological_process GO:0003674 molecular_function |
| InterPro families | IPR012577 NIPSNAP IPR011008 Dimeric alpha-beta barrel |
| Orthology group | MCL11302 |
Nucleotide sequence:
ATGAATTCCTTAAACAAGATTTTAGTTTTGAGTTCTGCAGCACCCAAAAATGCAAGATTG
ATCTCCACTACAAAAACAAGACTAAATGCTGACGATGGATGGCTTTCAAAATTGTTGGTT
CGCAAAATAGAACCGACAAAGGAATCTCACAGCCGAATGCTTAGCGACAAGGAGATTGTG
TATGCACTGCATACTCACAACATTCGGCCGGATTCCGTGGACAAATACTTACAAAATTAT
AAACAATCAGTGGAATTTGTTGAATCCCGGAAATCAGAGCTGGGATGTGAACTTGTCGGA
TCGTGGACTGTGTCCGTGGGGGACATGGACCAAGCATTGCATTTGTGGCGCTATGTTGGA
GGATTTGAAAAAATTGACAAGGCCAAGATATTGTTCAGGGAGAACAATGACTACCGTTCC
TTGGAAAAAGAAAGGGGAAACTTTGTAAGATCACGTCACTTGCAATATCTTCTGGCTTTC
AGCTTCTGGCCTAACGGTGACCCTCGTCCTGGAAAAAATATATACGAGATCCGATCTTAT
AGTCTAAAGCCGGGCACCATGATCGAATGGGGCAACAACTGGGCTCGCGGCCTCACTTAT
CGCCGCGGAAGAAACGAGGCCTTCGCTGGATATTTCTCCCAGATCGGAAGACTCTACAAT
GTTCACCACATCTGGTGCTACAAGGATCTCCAAGCTCGTCGTGAGACTCGTGAGAGTACT
TGGCGTAACCCCGGCTGGGACGAGTGCGTCGCCTACACCGTGCCGCTCATCAGGGAGATG
CACTGCCGTATCCTAGAGCCGACCGAGTTCTCGCCCACTCAGTAA
Protein sequence:
MNSLNKILVLSSAAPKNARLISTTKTRLNADDGWLSKLLVRKIEPTKESHSRMLSDKEIV
YALHTHNIRPDSVDKYLQNYKQSVEFVESRKSELGCELVGSWTVSVGDMDQALHLWRYVG
GFEKIDKAKILFRENNDYRSLEKERGNFVRSRHLQYLLAFSFWPNGDPRPGKNIYEIRSY
SLKPGTMIEWGNNWARGLTYRRGRNEAFAGYFSQIGRLYNVHHIWCYKDLQARRETREST
WRNPGWDECVAYTVPLIREMHCRILEPTEFSPTQ