| New model in OGS2.0 | DPOGS206906 |
|---|---|
| Genomic Position | scaffold1:- 1268002-1269533 |
| See gene structure | |
| CDS Length | 537 |
| Paired RNAseq reads | 953 |
| Single RNAseq reads | 2962 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012860 (2e-56) |
| Best Drosophila hit | HP1b, isoform B (4e-39) |
| Best Human hit | chromobox protein homolog 3 (3e-43) |
| Best NR hit (blastp) | heterochromatin protein 1beta-like protein [Bombyx mori] (2e-74) |
| Best NR hit (blastx) | heterochromatin protein 1beta-like protein [Bombyx mori] (9e-64) |
| GeneOntology terms | GO:0000785 chromatin GO:0003682 chromatin binding GO:0005634 nucleus GO:0006333 chromatin assembly or disassembly |
| InterPro families | IPR017984 Chromo domain subgroup IPR000953 Chromo domain IPR008251 Chromo shadow IPR016197 Chromo domain-like IPR018125 Chromo shadow, subgroup |
| Orthology group | MCL11004 |
Nucleotide sequence:
ATGGCTGATAAGAAAAAAGATGCTGAACCGGAGGGTGAGGAAGAATTTTCCGTAGAAAAA
GTTTTAGATCGACGCGTTAGGAATGGAAAGGTCGAGTATTTTTTGAAGTGGAAAGGCTAC
AGTGACGAAGACAACACCTGGGAGCCTGAAGAAAATCTTGACTGTCCTGATCTCATACAA
GCCTTCGAAGAGGCGCGAAAGAAGAAGGAAGCGGGAGGCAAAGGACCCAGATCCGATAAG
GATAAGAAAAGAAAATCTGCAGCAGCCACACCCGACTTAAAAGGTGCCAAGAAAGGAAAA
ACTGATGACAAAAAGACATCCGGCTTTGAACGTGGACTGGAACCAGAGAAGATTATTGGA
GCGACGGACAGCAGTGGAGAGTTAATGTTCCTTATGAAATGGCAAGGTACGGATGAAGCT
GATTTAGTGCCGGCTAAGCAAGCTAATGTCAAGTGTCCACAGGTTGTGATACAGTTCTAC
GAGGAACGACTAACATGGCACACACCATCTGCTGACGAGGGAAATAATGATGATTAG
Protein sequence:
MADKKKDAEPEGEEEFSVEKVLDRRVRNGKVEYFLKWKGYSDEDNTWEPEENLDCPDLIQ
AFEEARKKKEAGGKGPRSDKDKKRKSAAATPDLKGAKKGKTDDKKTSGFERGLEPEKIIG
ATDSSGELMFLMKWQGTDEADLVPAKQANVKCPQVVIQFYEERLTWHTPSADEGNNDD