| New model in OGS2.0 | DPOGS206909 |
|---|---|
| Genomic Position | scaffold1:- 1183095-1186529 |
| See gene structure | |
| CDS Length | 771 |
| Paired RNAseq reads | 42 |
| Single RNAseq reads | 154 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA008038 (2e-26) |
| Best Drosophila hit | peptidoglycan recognition protein LB, isoform C (2e-44) |
| Best Human hit | N-acetylmuramoyl-L-alanine amidase precursor (1e-29) |
| Best NR hit (blastp) | peptidoglycan recognition protein B [Samia cynthia ricini] (1e-59) |
| Best NR hit (blastx) | peptidoglycan recognition protein B [Samia cynthia ricini] (3e-59) |
| GeneOntology terms | GO:0042834 peptidoglycan binding GO:0016045 detection of bacterium GO:0006955 immune response GO:0006952 defense response GO:0005887 integral to plasma membrane GO:0005576 extracellular region GO:0050830 defense response to Gram-positive bacterium GO:0005515 protein binding GO:0008745 N-acetylmuramoyl-L-alanine amidase activity GO:0009253 peptidoglycan catabolic process GO:0004040 amidase activity GO:0000270 peptidoglycan metabolic process |
| InterPro families | IPR015510 Peptidoglycan recognition protein IPR002502 N-acetylmuramoyl-L-alanine amidase domain IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria |
| Orthology group | MCL12961 |
Nucleotide sequence:
ATGGACACGTATGAGAAGCAATATAAGATCCCAGAGGATATTTGTGCGTCGGAGTCTAGA
CCGGACATATTTTTAAATTCGCGAATTTTAAAAGGCCTGCCAAGAACTAACATCAGTTCA
TTCTTGGAACGTGCGTCGAAGGCAGCCCTAGCAGGAAGAATGACTCCTATTATTATCGGA
CTTTTTTGTGTGGCCGTCGGTGTAGTCGGATCTCCTTTACCACGTACACATTCAAGACAC
TATTCACATCAATTAGAATTTGTCTCGAAAGCGGACTGGGGAGGCAGGCACGCTACTTCG
GTCACCAAACTAAAAACCCCCGTCCCTTTGGTGGTGATCCATCATAGTTACATCCCCGGC
GCCTGTTATACGAAGGCAGCATGTTCTGCTGCAATGCAATCTATGCAAAACGCACACCAA
ATCACCAATGGCTGGGCTGATATTGGTTATAATTTCGCAGTTGGTAGTGATGGGAGAGTA
TACGAGGGGCGTGGTTTCAACCGCTTGGGTGCGCACGCGGTTGGTGTTAACGTAAAGAGC
ATTGGTATTGTCCTAATAGGAAATTGGGTCTCGGAAGTTCCTCCGAGAGTGCAACTGGAA
TCTGCGCAAGCATTGATTAAATTGGGAGTCGACCTCGGCTACATCAGTCCCGACTACAGC
CTGATGGGCCACAGACAAGTCGGATCCACCGAGTGTCCCGGGGGCGCACTCCAAAAGGAA
ATATCCACTTGGCCCAAATTTCAACCAAATAGGGAATTCCACCTGACATGA
Protein sequence:
MDTYEKQYKIPEDICASESRPDIFLNSRILKGLPRTNISSFLERASKAALAGRMTPIIIG
LFCVAVGVVGSPLPRTHSRHYSHQLEFVSKADWGGRHATSVTKLKTPVPLVVIHHSYIPG
ACYTKAACSAAMQSMQNAHQITNGWADIGYNFAVGSDGRVYEGRGFNRLGAHAVGVNVKS
IGIVLIGNWVSEVPPRVQLESAQALIKLGVDLGYISPDYSLMGHRQVGSTECPGGALQKE
ISTWPKFQPNREFHLT