| New model in OGS2.0 | DPOGS206917 |
|---|---|
| Genomic Position | scaffold1:- 1015625-1018720 |
| See gene structure | |
| CDS Length | 933 |
| Paired RNAseq reads | 168 |
| Single RNAseq reads | 595 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013016 (5e-133) |
| Best Drosophila hit | CG2663, isoform B (1e-92) |
| Best Human hit | alpha-tocopherol transfer protein-like (6e-25) |
| Best NR hit (blastp) | cellular retinaldehyde-binding protein [Bombyx mori] (4e-128) |
| Best NR hit (blastx) | cellular retinaldehyde-binding protein [Bombyx mori] (1e-124) |
| GeneOntology terms | GO:0008431 vitamin E binding GO:0005215 transporter activity GO:0005622 intracellular GO:0006810 transport |
| InterPro families | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR011074 Phosphatidylinositol transfer protein-like, N-terminal |
| Orthology group | MCL40804 |
Nucleotide sequence:
ATGGCGTCAGCTGCCACTCTAGTCCAGCCCACAGGTGAGATGTGGAAGAAGATTCGGGTG
GAACTTAACGAGGATGTTAACACCCGGGATAACGACTTGGCAGCAATCAAAGAATGGCTG
CGAAAGCAACCGCATCTTCCCGACTCCTGGGATGATGGCCGCACAATGACATTTCTTAGA
GGCTGCAGCTTCTCTTTGGAAAAATGCAAAAGAAAATTAGACATGTACTTTACAATGAGA
GCAGCTTGTCCAGAATTTTTCCAGGATAGAGATGTTAGTAGACCGGAGCTAGCAAATTTG
GTTACTAAAGTGCAAGGAGCTCCATTACCAGGTTTAACTCCAAACGGAAGACGAGTAACA
GTATGCCGTGGTCTTGATAAGAATATAGACGCGGATGAGTTGAACAACGTTTTCAAAGTC
GCGCTTATGATAGGAGATGTTCGTCTAAAAGAGGAGTTAGAGGGAGTTGGTGGCGACATA
TACATCCTAGACGCATCAGTTGTGTCTCCAAGCCATTTAGCAAAGTTGTCTCCGTCGGCG
ATAAAGAAGTTTTTAATATGTGTTCAGGAGGCGTATCCAGTCAAGTTAAAAGAAGTACAT
GTCGTGAATACGTCACCCATAATCGAAACCTTAATAAACTTTATTAAGCCATTCCTTAAG
GATAAAATTAAAAACAGGATATTTATTCACTCTGACATAAACACAATATACGATCACGTG
CCAAGGGATATGCTTCCAGAAGAATATGGCGGCAATGGTGGTTCATTAGACGAAGTAAAT
AGGGAATGGATGAAAAAGTTAGCTGATTACACCCAGTGGTTCAAAGAACAGGAATCCGTG
AAAGCCAACGAAGCGCTAAGACTGGGGAAACCCACCAATTACGATGAGCTCTTCGGTATT
GACGGATCATTTAGACAATTGTCTATCGATTAA
Protein sequence:
MASAATLVQPTGEMWKKIRVELNEDVNTRDNDLAAIKEWLRKQPHLPDSWDDGRTMTFLR
GCSFSLEKCKRKLDMYFTMRAACPEFFQDRDVSRPELANLVTKVQGAPLPGLTPNGRRVT
VCRGLDKNIDADELNNVFKVALMIGDVRLKEELEGVGGDIYILDASVVSPSHLAKLSPSA
IKKFLICVQEAYPVKLKEVHVVNTSPIIETLINFIKPFLKDKIKNRIFIHSDINTIYDHV
PRDMLPEEYGGNGGSLDEVNREWMKKLADYTQWFKEQESVKANEALRLGKPTNYDELFGI
DGSFRQLSID