| New model in OGS2.0 | DPOGS206922 |
|---|---|
| Genomic Position | scaffold1:- 938555-939622 |
| See gene structure | |
| CDS Length | 531 |
| Paired RNAseq reads | 215 |
| Single RNAseq reads | 906 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012893 (2e-74) |
| Best Drosophila hit | Bet3 (9e-73) |
| Best Human hit | trafficking protein particle complex subunit 3 (3e-53) |
| Best NR hit (blastp) | trafficking protein particle complex subunit 3 [Bombyx mori] (3e-92) |
| Best NR hit (blastx) | trafficking protein particle complex subunit 3 [Bombyx mori] (4e-89) |
| GeneOntology terms | GO:0030008 TRAPP complex GO:0016192 vesicle-mediated transport GO:0033227 dsRNA transport GO:0005737 cytoplasm |
| InterPro families | IPR016721 TRAPP I complex, Bet3 IPR007194 Transport protein particle (TRAPP) component IPR011644 Haem NO binding |
| Orthology group | MCL14589 |
Nucleotide sequence:
ATGTCTCGTCAAACTTCAAGACTCGATGCGAAGAAAGTGAATTCTGAATTATTAACACTT
ACGTATGGAGCATTGGTATCACAAATGTTGAAAGAGATAGATAATCCTGAGGATGTCAAC
AAACAATTGGAACGCATTGGTTACAATATGGGCGTTCGTCTTATCGAGGATTTTCTAGCC
CGGACACCTTCTACACGATGCCTCGAAATGCGGGAGACTGCTGATAAGATACAACAGGCT
TTCAGATTATATTTAAACATGCAGCCGGTTGTAACAAGTTGGAGCAGTGCTGGTGATGAA
TTTTCATTAGTATGGGACCAGTGTCCATTAAGTGAGTGGGTTGAAATGCCCAATAATGGG
CTTAAGTATTGCGCTTTGATACCTGGAGCTATCAGAGGTGCTTTACAGATGGTGCAGCTA
GATGTGCAGTGCTGGTTTGTACAGGATTTACTTAAAGGTGATCCTATCACTGAGCTGAGA
GTGAAGTATATTAAGAGATTAGAAGACGCTGTGCCAGCTGGTGAAGACTAA
Protein sequence:
MSRQTSRLDAKKVNSELLTLTYGALVSQMLKEIDNPEDVNKQLERIGYNMGVRLIEDFLA
RTPSTRCLEMRETADKIQQAFRLYLNMQPVVTSWSSAGDEFSLVWDQCPLSEWVEMPNNG
LKYCALIPGAIRGALQMVQLDVQCWFVQDLLKGDPITELRVKYIKRLEDAVPAGED