| New model in OGS2.0 | DPOGS206927 |
|---|---|
| Genomic Position | scaffold1:- 723811-726404 |
| See gene structure | |
| CDS Length | 882 |
| Paired RNAseq reads | 369 |
| Single RNAseq reads | 1390 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012903 (6e-125) |
| Best Drosophila hit | ubiquitin fusion-degradation 1-like (9e-92) |
| Best Human hit | ubiquitin fusion degradation protein 1 homolog isoform A (3e-87) |
| Best NR hit (blastp) | PREDICTED: similar to ubiquitin fusion degradaton protein [Nasonia vitripennis] (9e-116) |
| Best NR hit (blastx) | PREDICTED: similar to ubiquitin fusion degradaton protein [Nasonia vitripennis] (2e-111) |
| GeneOntology terms | GO:0006511 ubiquitin-dependent protein catabolic process GO:0000502 proteasome complex GO:0006508 proteolysis |
| InterPro families | IPR004854 Ubiquitin fusion degradation protein UFD1 |
| Orthology group | MCL14394 |
Nucleotide sequence:
ATGACCTATCGTTGCTACTCAGTTTCTATGCTACCTGGAAACGAAAGGCAAGATGTTGAA
AGGGGAGGAAAAATTATTATGCCACCATCAGCTTTGGAGCTGCTAACTCGTCTTAACATC
GAATACCCAATGATATTCAAGTTAACAAATAAGAAGACAAAAAGAATTACACATTGTGGT
GTTTTGGAGTTTGTTGCTGATGAGGGAAAGGTTTATTTGCCACACTGGATGATGGCTAAT
TTAGTACTAGAAGAAGGTACCCTGGTGCAAATAGAGAGTGTCTCCCTACCAGTTGCTACA
TTCTCGAAGTTCCAACCACTTTCAGAAGACTTTCTCGACATTTCCAATCAAAAAGCAGTG
TTGGAAAACTGTTTACGTAACTTCTCATGCCTGACTACAGGAGATGTCATAGCAATAAAG
TATAATTCTAAAGTGTATGAACTCTGTGTGTTGGAGACGAAACCCGGAAACGCTGTGATT
ATTATTGAATGTGATATGAATGTTGAGTTTGCTCCACCGGTTGGGTATAAAGAAGAAGAT
CATATAACAAAAGGTGAAGGTAGCTCGGATATGGGTCGCATGGATGAAGACCCAGCTTCT
ATGATGCCGGAGCCGAGTGGTTTTGTGGCATTCAGAGGTGAAGGGAACAGGCTTGATGGT
AAAAAGAAAAAGCTAACCAGCGAAAGTGAATCCGAACCACAGGCATCCAATTCCAGACAG
CCATATGTTCGTGGAATACCGGATTACGACTATGTTATTGGTACACTCAGATTTATCAGA
AATTCAAGGCCCCCGAGCGCGAAAGAAGAAGTACAAACAGAACCATTCCAAGCCTTTAAA
GGGGAGGGTTTCACATTGCGTACTGCCAAGTCGAAGAACTGA
Protein sequence:
MTYRCYSVSMLPGNERQDVERGGKIIMPPSALELLTRLNIEYPMIFKLTNKKTKRITHCG
VLEFVADEGKVYLPHWMMANLVLEEGTLVQIESVSLPVATFSKFQPLSEDFLDISNQKAV
LENCLRNFSCLTTGDVIAIKYNSKVYELCVLETKPGNAVIIIECDMNVEFAPPVGYKEED
HITKGEGSSDMGRMDEDPASMMPEPSGFVAFRGEGNRLDGKKKKLTSESESEPQASNSRQ
PYVRGIPDYDYVIGTLRFIRNSRPPSAKEEVQTEPFQAFKGEGFTLRTAKSKN