New model in OGS2.0 | DPOGS206928  |
---|---|
Genomic Position | scaffold1:- 719145-721243 |
See gene structure | |
CDS Length | 606 |
Paired RNAseq reads   | 955 |
Single RNAseq reads   | 2147 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012904 (2e-102) |
Best Drosophila hit   | Rab35 (4e-79) |
Best Human hit | ras-related protein Rab-35 isoform 1 (1e-78) |
Best NR hit (blastp)   | PREDICTED: similar to ras-related protein Rab, putative [Tribolium castaneum] (1e-98) |
Best NR hit (blastx)   | PREDICTED: similar to ras-related protein Rab, putative [Tribolium castaneum] (2e-90) |
GeneOntology terms    | GO:0005739 mitochondrion GO:0000166 nucleotide binding GO:0005525 GTP binding GO:0015031 protein transport GO:0007264 small GTPase mediated signal transduction |
InterPro families    | IPR006688 ADP-ribosylation factor IPR003577 Ras small GTPase, Ras type IPR003579 Ras small GTPase, Rab type IPR003578 Small GTPase, Rho type IPR002041 Ran GTPase IPR020851 Small GTPase IPR013753 Ras IPR001806 Ras GTPase IPR005225 Small GTP-binding protein |
Orthology group | MCL15786 |
Nucleotide sequence:
ATGGCCCGCGAGTTTGATCATCTTTTTAAACTGCTGATTATCGGTGACAGTGGTGTAGGA
AAAAGCTGTCTCCTTCTCCGTTTTGCGGACAACACTTTCTCCGGTAGTTATATTACAACG
ATCGGTGTGGATTTCAAAATAAGAACTTTAGAGATAAATGGTGAAAGAGTTAAACTTCAG
ATATGGGATACAGCCGGGCAAGAGAGGTTTAGAACGATCACGAGCACGTACTATAGAGGG
ACTCACGGTGTCATCGTGGTATACGATGTCACTAATGGGGAGTCGTTTGCTAATGTGAAG
AGGTGGTTGCACGAGATCGAACAAAATTGTGATGTCGTCAACAAAGTACTAGTTGGTAAT
AAAAACGATTGTCCATCAAGAAAAGTAGTCGTGACGGAGGATGCTCAAAGATTTGCAAAT
CAAATGAACATACCATTGTTTGAGACAAGTGCTAAAGAAAACATCAATGTAGAGGAAATG
TTTCTAACTATTACAAAAATGGTTCTAAGGTCTAAGTTGGAAATGAAGGAGAGACAAAAT
GTAACAGCAAACGACACAGTAAACTTAAAGAAGAGCCACAAAGGGAAGAAAAAATGTTGC
CACTGA
Protein sequence:
MAREFDHLFKLLIIGDSGVGKSCLLLRFADNTFSGSYITTIGVDFKIRTLEINGERVKLQ
IWDTAGQERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCDVVNKVLVGN
KNDCPSRKVVVTEDAQRFANQMNIPLFETSAKENINVEEMFLTITKMVLRSKLEMKERQN
VTANDTVNLKKSHKGKKKCCH