New model in OGS2.0 | DPOGS206933  |
---|---|
Genomic Position | scaffold1:- 647799-650704 |
See gene structure | |
CDS Length | 1359 |
Paired RNAseq reads   | 184 |
Single RNAseq reads   | 465 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012914 (0.0) |
Best Drosophila hit   | RhoGAP5A, isoform A (6e-115) |
Best Human hit | N-chimaerin isoform a (3e-93) |
Best NR hit (blastp)   | chimerin (rho- gtpase-activating protein) [Aedes aegypti] (4e-138) |
Best NR hit (blastx)   | chimerin (rho- gtpase-activating protein) [Aedes aegypti] (7e-129) |
GeneOntology terms    | GO:0019992 diacylglycerol binding GO:0005622 intracellular GO:0005515 protein binding GO:0043408 regulation of MAPKKK cascade GO:0048749 compound eye development GO:0034334 adherens junction maintenance GO:0016337 cell-cell adhesion |
InterPro families    | IPR000980 SH2 motif IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol binding IPR000198 Rho GTPase-activating protein domain IPR020454 Diacylglycerol/phorbol-ester binding IPR008936 Rho GTPase activation protein |
Orthology group | MCL15960 |
Nucleotide sequence:
ATGGAAAATCTGAAAAATATTTGGAAACCAGAACTTTACAGAATTCAGATGGAGGCTCCA
ACGCCGAAGCGCATAATTTGTGAGAATTGTCCATATAGACCTGAATTTTATGGGAAAGAA
TACCATGGTGTAATGGGACACAAGGAGGCTACATTATTATTAGAAGAGGAGCCCAATGGA
GCTTTTCTTATTAGGAAAGGCAATGAGCTTAATGATTTTTATACACTCTCTTGGAGGTTC
AACGATAGAATACATCACTATAAACTATATTACGATGGGACACATTATATTAAGGACAAG
AGATATGACTGTATATATGATCTAGTTGCCGATGGCCTCATATTCTGTCACATGGAGCTA
AAGGCACATCATATACTAGAGATGATTAACTGTCGAACAAATTACACAGAAAGTCCCTAT
GTTACTCTTAATAGAAGAAAACTGAATACTTTGTCTAAAATGCAACAGGCATCCAATAAA
TCTAGTCCAATTTTCCATAAAAACGAGAACAAAATTGTTGAAGTTGACAATGATGTCAAG
AAAACATTAGATCTAACACCAATGCTAGAAGATAGTCCGTTACTATTTAAGTATCTGAAA
GCGCATAGTTTTAAGTTGCATACATTTAAAGGACTAAATTGGTGTGAACTGTGCGCCAAC
TTTCTTTGGGGCTTTACAGCGCAAGGAGTCAAATGTGAAGACTGTGGTTTCATAGCTCAC
TCGAAATGTTCTGAGAGAGTACCTAATCACTGTTTACCGGACCTAAAGAAACTCAGGGGA
GTATTCGGTATAGACCTGACAACATTACTGAATGCTCACTCAAGTACACTGCCATTTGTA
GTAAGGAAGTGTGTGAACGAAATTGAAGCCAGGGGAATGGATTCTGAGGGTATTTACAGA
GTATCAGGATTTGCAGATGAGATTGAGGCTTTGAAAATGGCTTTTGATAAAGATGGTGAA
TCAACCGATTTGAGCGTTTTTAGCAACATAAATGTGATAGCGGGGACACTAAAGCTTTAT
CTTCGACTGTTACCAGTGCCTCTTATTACCTATGACGTACATCCGAAACTCATTAGTGCC
ATTCAAACGAAAACAACGGCCTTGCAAGTGACAATGCTGCGGGAGTGTCTCGATTTGCTT
CCTCCGGCACATTTCAACTGCTTACAGTACATGGTTCAACATTTAAATAGAGTTTCTCAG
CATGCGGATGTGAACAAAATGTCAGCTCATAACCTGAGTACCGTTTTTGCTCCAACATTG
GTCGCTACCCCACCAGCTATCACAGACTTGGCGTTTGAAATAAGAGCGTTACAAGCTCTC
ATTGAATTCTGTCCACAGATTTACTATGGCAGCAAGTAA
Protein sequence:
MENLKNIWKPELYRIQMEAPTPKRIICENCPYRPEFYGKEYHGVMGHKEATLLLEEEPNG
AFLIRKGNELNDFYTLSWRFNDRIHHYKLYYDGTHYIKDKRYDCIYDLVADGLIFCHMEL
KAHHILEMINCRTNYTESPYVTLNRRKLNTLSKMQQASNKSSPIFHKNENKIVEVDNDVK
KTLDLTPMLEDSPLLFKYLKAHSFKLHTFKGLNWCELCANFLWGFTAQGVKCEDCGFIAH
SKCSERVPNHCLPDLKKLRGVFGIDLTTLLNAHSSTLPFVVRKCVNEIEARGMDSEGIYR
VSGFADEIEALKMAFDKDGESTDLSVFSNINVIAGTLKLYLRLLPVPLITYDVHPKLISA
IQTKTTALQVTMLRECLDLLPPAHFNCLQYMVQHLNRVSQHADVNKMSAHNLSTVFAPTL
VATPPAITDLAFEIRALQALIEFCPQIYYGSK