DPGLEAN15515 in OGS1.0

New model in OGS2.0DPOGS206938 
Genomic Positionscaffold1:- 432688-433566
See gene structure
CDS Length879
Paired RNAseq reads  81
Single RNAseq reads  248
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA012880 (1e-118)
Best Drosophila hit  Spt3 (8e-19)
Best Human hittranscription initiation protein SPT3 homolog isoform 1 (2e-22)
Best NR hit (blastp)  hypothetical protein TcasGA2_TC002852 [Tribolium castaneum] (1e-34)
Best NR hit (blastx)  hypothetical protein TcasGA2_TC002852 [Tribolium castaneum] (6e-34)
GeneOntology terms












  
GO:0016986 transcription initiation factor activity
GO:0030914 STAGA complex
GO:0043966 histone H3 acetylation
GO:0004402 histone acetyltransferase activity
GO:0005634 nucleus
GO:0016563 transcription activator activity
GO:0003713 transcription coactivator activity
GO:0006366 transcription from RNA polymerase II promoter
GO:0006357 regulation of transcription from RNA polymerase II promoter
GO:0006355 regulation of transcription, DNA-dependent
GO:0016578 histone deubiquitination
GO:0003702 RNA polymerase II transcription factor activity
GO:0003677 DNA binding
GO:0033276 transcription factor TFTC complex
InterPro families
  
IPR003195 Transcription initiation factor IID, 18kDa subunit
IPR009072 Histone-fold
Orthology groupMCL14387

Nucleotide sequence:

ATGCACGGGTTTGGGGATAATCCGAATCCAAATGCCGCTACTGTTGTTTTAGTCGAAAAC
ATAGTTTTGCAACAATTGAGAATGATGATCCAAGAAGCTAGCAACAATGCAATAAAGAGA
GGCTCTAAATCCATATCAAATTGCGATATTATATATTTAATGAAAAAAAATCCCGTCAAA
TTGAAAAGACTCTACGATTATCAAGTAAAGTTGGACCGTATTGACAAGAATCGTCAATCA
GCTCCCAGTATTACGACAGAAACCATATTGCCAGGCATTATATTAGAAAACGATAAAGAT
CCTACAATAAAAAGGAGACGCACTCACATTTATATAATAGAGGAGATGGATGAAACCGAT
GAAGTAAAGCAAATTAAATTTGACTGCATAGACTATTTGAGAAAAGTGCGTGCAGCAAAA
ATATCAGAAGCAATGTCTTTTGAGAAGTATGAAGCATATCATAAAGCAAGATGTAGTTCA
TTCCGTTCCGGCTATGGTTTGAGCAAGGGTTTTGTTAAACTAGAGAAATGGGTAAATCCT
ACAAAAGAATTGAAAATTAATCAGAATGCTTTGGAAGTCTTGTGCTTCTTAGCATATGAA
ACAGTAGCTGATATTGTTGATGCTGTATTTTTAATACGACAAGATGGTAAGAAAAAGTAT
GGAGATCCGTTTAGTAAGTTCGAAGGGGGACATTTTTGTAATCCGCAGAGTTTAAACAAT
GCTGTATACATCAAATCTGGCTATGAAGGTGTACCAGCCATCACAGTTGCTGAAGTGAGA
GAGGTTTTGAGGAGATATTACACACCAACAGTTGGATTACGGGGACAGTTTTATAGAAGC
ATGAGTTTGGATTTACCTTCAAGATATATTGCTATTTAA

Protein sequence:

MHGFGDNPNPNAATVVLVENIVLQQLRMMIQEASNNAIKRGSKSISNCDIIYLMKKNPVK
LKRLYDYQVKLDRIDKNRQSAPSITTETILPGIILENDKDPTIKRRRTHIYIIEEMDETD
EVKQIKFDCIDYLRKVRAAKISEAMSFEKYEAYHKARCSSFRSGYGLSKGFVKLEKWVNP
TKELKINQNALEVLCFLAYETVADIVDAVFLIRQDGKKKYGDPFSKFEGGHFCNPQSLNN
AVYIKSGYEGVPAITVAEVREVLRRYYTPTVGLRGQFYRSMSLDLPSRYIAI