New model in OGS2.0 | DPOGS206938  |
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Genomic Position | scaffold1:- 432688-433566 |
See gene structure | |
CDS Length | 879 |
Paired RNAseq reads   | 81 |
Single RNAseq reads   | 248 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012880 (1e-118) |
Best Drosophila hit   | Spt3 (8e-19) |
Best Human hit | transcription initiation protein SPT3 homolog isoform 1 (2e-22) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC002852 [Tribolium castaneum] (1e-34) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC002852 [Tribolium castaneum] (6e-34) |
GeneOntology terms    | GO:0016986 transcription initiation factor activity GO:0030914 STAGA complex GO:0043966 histone H3 acetylation GO:0004402 histone acetyltransferase activity GO:0005634 nucleus GO:0016563 transcription activator activity GO:0003713 transcription coactivator activity GO:0006366 transcription from RNA polymerase II promoter GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0006355 regulation of transcription, DNA-dependent GO:0016578 histone deubiquitination GO:0003702 RNA polymerase II transcription factor activity GO:0003677 DNA binding GO:0033276 transcription factor TFTC complex |
InterPro families    | IPR003195 Transcription initiation factor IID, 18kDa subunit IPR009072 Histone-fold |
Orthology group | MCL14387 |
Nucleotide sequence:
ATGCACGGGTTTGGGGATAATCCGAATCCAAATGCCGCTACTGTTGTTTTAGTCGAAAAC
ATAGTTTTGCAACAATTGAGAATGATGATCCAAGAAGCTAGCAACAATGCAATAAAGAGA
GGCTCTAAATCCATATCAAATTGCGATATTATATATTTAATGAAAAAAAATCCCGTCAAA
TTGAAAAGACTCTACGATTATCAAGTAAAGTTGGACCGTATTGACAAGAATCGTCAATCA
GCTCCCAGTATTACGACAGAAACCATATTGCCAGGCATTATATTAGAAAACGATAAAGAT
CCTACAATAAAAAGGAGACGCACTCACATTTATATAATAGAGGAGATGGATGAAACCGAT
GAAGTAAAGCAAATTAAATTTGACTGCATAGACTATTTGAGAAAAGTGCGTGCAGCAAAA
ATATCAGAAGCAATGTCTTTTGAGAAGTATGAAGCATATCATAAAGCAAGATGTAGTTCA
TTCCGTTCCGGCTATGGTTTGAGCAAGGGTTTTGTTAAACTAGAGAAATGGGTAAATCCT
ACAAAAGAATTGAAAATTAATCAGAATGCTTTGGAAGTCTTGTGCTTCTTAGCATATGAA
ACAGTAGCTGATATTGTTGATGCTGTATTTTTAATACGACAAGATGGTAAGAAAAAGTAT
GGAGATCCGTTTAGTAAGTTCGAAGGGGGACATTTTTGTAATCCGCAGAGTTTAAACAAT
GCTGTATACATCAAATCTGGCTATGAAGGTGTACCAGCCATCACAGTTGCTGAAGTGAGA
GAGGTTTTGAGGAGATATTACACACCAACAGTTGGATTACGGGGACAGTTTTATAGAAGC
ATGAGTTTGGATTTACCTTCAAGATATATTGCTATTTAA
Protein sequence:
MHGFGDNPNPNAATVVLVENIVLQQLRMMIQEASNNAIKRGSKSISNCDIIYLMKKNPVK
LKRLYDYQVKLDRIDKNRQSAPSITTETILPGIILENDKDPTIKRRRTHIYIIEEMDETD
EVKQIKFDCIDYLRKVRAAKISEAMSFEKYEAYHKARCSSFRSGYGLSKGFVKLEKWVNP
TKELKINQNALEVLCFLAYETVADIVDAVFLIRQDGKKKYGDPFSKFEGGHFCNPQSLNN
AVYIKSGYEGVPAITVAEVREVLRRYYTPTVGLRGQFYRSMSLDLPSRYIAI