New model in OGS2.0 | DPOGS206984  |
---|---|
Genomic Position | scaffold1:+ 38613-47588 |
See gene structure | |
CDS Length | 3495 |
Paired RNAseq reads   | 1248 |
Single RNAseq reads   | 2772 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012946 (0.0) |
Best Drosophila hit   | kurz (0.0) |
Best Human hit | probable ATP-dependent RNA helicase DHX37 (0.0) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC015731 [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC015731 [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0008026 ATP-dependent helicase activity GO:0005634 nucleus GO:0004386 helicase activity GO:0003676 nucleic acid binding GO:0005524 ATP binding |
InterPro families    | IPR014001 DEAD-like helicase IPR001650 Helicase, C-terminal IPR007502 Helicase-associated domain IPR011709 Domain of unknown function DUF1605 IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site |
Orthology group | MCL15355 |
Nucleotide sequence:
ATGGGTAAAAGACGATACAATGCAAAGGCTCGCCAAGTGGTCAAAACAGATATTGACGAT
TCCAAAACTAATGAGATAAAATTAGAATTCACATCAAATGAATATGGAACAAGTGATACT
GCAAATGCATTGGCCTTGCCTTCAAGAAAGAGAGAAACTAAGATTATTGCAGACAAAAAA
GAAAAGACTAGATTTCTATCAAAGGCCCAAAGGAAACGGTTAGAAAAGATAGTTGATAAG
AAGAAAAAGAAAGAAAATAGAGCTGCGCTTTTGGAATCCTTGTCACAAGTACAAGCAACT
CCTGAGGAAGTGAAACAATTGACTACAATATCCTCTGTCCAGACACTCGGTTTGAGAAAG
TTGACAGAGTTTAATTTAGAAACTACTCAAAATGCTACTGAAGTTAGTGAACAAAAGAAG
TTTAGTAGTATTGCAGGTGCAAAGAAAAGATTGAGACTTTTAAAAATGGATAGATCTGAT
GACAATAAAAAGAAGAAATATGATCCTAATGTTGTTGGTCTCGAAGAATCTTCTGATGAT
TCAAGTATAGAAACTGATGATAGCGAAGGCAAAGACACATGTGAAGTAATTGAAACCACA
GATAAAATAATCAATGTTGAAAAAGGTGCTACATCATCAGCCCATAGAAGTAATGAAACA
AATACTAAGGCAATTGAAATTAAAGAAAGTGAACCTGTAGAAGTGGAAGCGGAAGTAAAA
AAGCCTATTCTAGAACATCCTACCATAAATGTTCAAGTTAAAAGAGACCCCAAAGTTCAA
GTGGCTAGATTGAAATTACCAATATTAGGAGAGGAACAAAGAGTTATGGAGTTGATAAAC
GAAAATGAATTTGTCATCGTCGCTGGTGAAACTGGTAGCGGTAAAACTACTCAGATACCT
CAGTTTCTCTATGAAGCTGGGTATACAGAAAATAAAATGATAGCAGTTACTGAACCTCGA
AGAGTGGCAACTGTGGCTATGTCAGCTCGAGTCGGTTATGAACTGGGCTTGAGCAGCAAA
GAGGTTTCATATCTGATGAGATTTGAAGGAAATGTCACCAAAGACACTAAGATTAAGTTT
ATGACTGACGGTGTTCTCTTAAAAGAGATCCAATCGGATTTTCTCTTAAGCAAATATTCA
GTTGTTATTATAGACGAAGCTCATGAAAGAAGCATGTACACAGATATACTTCTGGGTTTG
CTATCTAGAATTGTACCGTTGAGACGTAAAAGGGGATGTCCATTGAGACTCATTATAATG
TCAGCTACCCTCAGAGTTGAGGATTTCACAGAAAATACGAGACTTTTCAAAGTTCCACCT
CCTGTTATAGAGATACAATCTAGGCAGTTCCCTGTGACGGTACATTTCAATAAACACACA
TACAGTGATTATTTGAAAGAAGCTTTTAAGAAAACAGTCAAAATACACACCAGGCTACCG
GAAGGTGGAATTTTGATATTTGTGACTGGCCAGCAAGAGGTAAACTATCTAGTAAGGAAA
TTAAGAGCGTCTTTTCCATACCACAAAGGTGTTGATTATTCGTCATTAATAAACAAAAAG
GTGAATGTAGTTGACACCTCCTTGGACTCGGAGCCTGATGATATTGAATCGGATGATGAT
GAGGTGGAAAAGGAAATGAAGCGGATACGCAAAGCCAGGAAAAAAGCGAAGCGCAAGACT
ATAAAGTTACCAAAAATTAGTTTGGACGATTTTGACATGCCGGAGGACGATGGCCAGCCA
GATTTAGTCAGTGACGCTGACAGCGAGGGTCATTTGAGCGATTCAGATGCCGATGAATCA
ACTCTGACACCTATCGTAAAATCCAGCCAACAGCCGCTGTGGGTGTTGCCGTTGTATTCT
ATGTTGAGTACAGCGAAACAGGGTCGGGTGTTCGAAACCCCGCCCGCTGGCACAAGACTG
TGCGTCGTCAGCACCGACGTCGCGGAGACATCCCTCACGATACCCAGCATAAAGTACGTC
GTTGATACCGGCAAGAAGAAGATGCGTATATACGATCACGTGACCGGCGCAAGCGCATGG
CGTGTAGTGTGGACGTCTCAGGCCAGCGCGGAACAACGTTCGGGCCGAGCGGGACGGACG
GGTCCGGGACACGTATATAGATTGTACAGTAGTGCGGTGTACCAACACGAGTGTGTACCA
CAGTACAAACCCGACCTCTGTACGAGGCCCGTAGATCATTTGATGCTGACCCTAAAATGT
ATGGGCATCGATAAGGTGGTTAACTTTCCATATCCCACCGCACCAGACAGGATGCAGTTG
CGTTTAGCTGAGAAGCGACTAGAAGTTTTGGGAATTTTGGAGAAGGTTGAAATGAGGAAC
AGGAGAAAAGATGACGAAGAGGTGTTAAAAGTAACTCCGCTGGGGAAGGCTGTGTCGGCG
TTTCCGCTGCTTCCTCGCTACGGCAAGATGTTGGCTCTCAGTCATCAATATACTTTACTA
CCGTACGCTATAACCATCGTTTCTGCTTTAACTGTGCCGGAGGTAATGTCGGGTAAAACC
GATAGTTGGCCTGCGACCGGTAATATGTTATTGCTCGGCGACCCCGGCGTACTACTGAGA
GCGGTCGGAGCTTGCGATCATAGTACGGAGGCGTTGTCTGTGTTCTGTGCCAAGTATGGA
CTAAGGGAGAAGGCCATAATAGAAATTAGGAAGCTTCGGAAGCAGCTAGCATCTGAGATA
AATCTCAGCGTGTCCGGTGTTAATCTTGTTGTGGATCCTAAACTGCAGCCTCCTGATGAC
AAACAGGCGAAATTGTTGAGACAGTTGTTGCTCAGCGGTCTAGGAGACCAGGTCGCGAGG
AAGATTAGTATGGCAGAAGTTAAAGAAGGTGAGGACAAACGGAAATACAAATACGCCTAC
CGCTGTTCTGATCTGGACGAGCCGGTGTTCATCCACTCGGAGTCCATATTACGCAAAGTG
ATACCCGAATGGGTGATATACCAGGAGCTGTACGAGACCGGCCCGGATGACAGGAAGAAG
ATGATCATGAGGAACATTACCGCCGTAGAACCTGAATGGCTGCCAGTTTATGTGCCGTTC
CTATGTAATTTAGGTGAACCGCTATCGGAGCCCGAGCCGCGATACGACGCGAGGTCGGGC
AGGGTGAAATGTCACTTTAAAGGGACATTCGGTAAAAGTTGTTGGGAACTACCCACAGTT
GAGATCGATTATCCGGAGAAAATAGACAAATACAGATGGTTCGCAAGATTCCTTTTGGAA
GGTTCAGTATTCGTGAAGCTCAAGAAATACGCGGCGTCCCTACTGTCACCCCCCTCCACT
ATGATAAAGAGCTGGGCGAAATTACAACCAAGGACGGAAATACTATTGAAGGCTCTGATA
GACAAGAAAATAGGCTCCAAAGATAAGATGGAGCAGATTTGGAAAGAAAAACCCACTTAT
TTGCAGGACGAATATTTGAAATGGGTCCCGGAGTCGGCTCACAACGAAGTTATATTGTAC
TGGCCGCCGTTGTAG
Protein sequence:
MGKRRYNAKARQVVKTDIDDSKTNEIKLEFTSNEYGTSDTANALALPSRKRETKIIADKK
EKTRFLSKAQRKRLEKIVDKKKKKENRAALLESLSQVQATPEEVKQLTTISSVQTLGLRK
LTEFNLETTQNATEVSEQKKFSSIAGAKKRLRLLKMDRSDDNKKKKYDPNVVGLEESSDD
SSIETDDSEGKDTCEVIETTDKIINVEKGATSSAHRSNETNTKAIEIKESEPVEVEAEVK
KPILEHPTINVQVKRDPKVQVARLKLPILGEEQRVMELINENEFVIVAGETGSGKTTQIP
QFLYEAGYTENKMIAVTEPRRVATVAMSARVGYELGLSSKEVSYLMRFEGNVTKDTKIKF
MTDGVLLKEIQSDFLLSKYSVVIIDEAHERSMYTDILLGLLSRIVPLRRKRGCPLRLIIM
SATLRVEDFTENTRLFKVPPPVIEIQSRQFPVTVHFNKHTYSDYLKEAFKKTVKIHTRLP
EGGILIFVTGQQEVNYLVRKLRASFPYHKGVDYSSLINKKVNVVDTSLDSEPDDIESDDD
EVEKEMKRIRKARKKAKRKTIKLPKISLDDFDMPEDDGQPDLVSDADSEGHLSDSDADES
TLTPIVKSSQQPLWVLPLYSMLSTAKQGRVFETPPAGTRLCVVSTDVAETSLTIPSIKYV
VDTGKKKMRIYDHVTGASAWRVVWTSQASAEQRSGRAGRTGPGHVYRLYSSAVYQHECVP
QYKPDLCTRPVDHLMLTLKCMGIDKVVNFPYPTAPDRMQLRLAEKRLEVLGILEKVEMRN
RRKDDEEVLKVTPLGKAVSAFPLLPRYGKMLALSHQYTLLPYAITIVSALTVPEVMSGKT
DSWPATGNMLLLGDPGVLLRAVGACDHSTEALSVFCAKYGLREKAIIEIRKLRKQLASEI
NLSVSGVNLVVDPKLQPPDDKQAKLLRQLLLSGLGDQVARKISMAEVKEGEDKRKYKYAY
RCSDLDEPVFIHSESILRKVIPEWVIYQELYETGPDDRKKMIMRNITAVEPEWLPVYVPF
LCNLGEPLSEPEPRYDARSGRVKCHFKGTFGKSCWELPTVEIDYPEKIDKYRWFARFLLE
GSVFVKLKKYAASLLSPPSTMIKSWAKLQPRTEILLKALIDKKIGSKDKMEQIWKEKPTY
LQDEYLKWVPESAHNEVILYWPPL