| New model in OGS2.0 | DPOGS207002 |
|---|---|
| Genomic Position | scaffold1:+ 616616-623255 |
| See gene structure | |
| CDS Length | 2718 |
| Paired RNAseq reads | 2664 |
| Single RNAseq reads | 8091 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012922 (0.0) |
| Best Drosophila hit | beta adaptin (0.0) |
| Best Human hit | AP-1 complex subunit beta-1 isoform b (0.0) |
| Best NR hit (blastp) | GJ15746 [Drosophila virilis] (0.0) |
| Best NR hit (blastx) | GG19251 [Drosophila erecta] (0.0) |
| GeneOntology terms | GO:0005886 plasma membrane GO:0030121 AP-1 adaptor complex GO:0030135 coated vesicle GO:0008021 synaptic vesicle GO:0007269 neurotransmitter secretion GO:0006901 vesicle coating GO:0016183 synaptic vesicle coating GO:0005515 protein binding GO:0006886 intracellular protein transport GO:0016192 vesicle-mediated transport GO:0008565 protein transporter activity |
| InterPro families | IPR008152 Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain IPR016342 Adaptor protein complex, beta subunit IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal IPR015151 Clathrin adaptor, beta-adaptin, appendage, C-terminal subdomain IPR016024 Armadillo-type fold IPR009028 Clathrin/coatomer adaptor, adaptin-like, appendage, C-terminal subdomain IPR013041 Clathrin/coatomer adaptor, adaptin-like, appendage, Ig-like subdomain IPR011989 Armadillo-like helical IPR013037 Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain IPR012295 Beta2-adaptin/TATA-box binding, C-terminal |
| Orthology group | MCL11596 |
Nucleotide sequence:
ATGACTGATTCAAAATACTTCACAACTACAAAGAAAGGCGAAATATTCGAGCTCAAGTCG
GAGCTGAATAGCGATAAGAAAGAAAAGAAGAAGGAAGCTGTTAAAAAGGTGATAGCTTCC
ATGACCGTGGGCAAAGATGTGTCAGCTCTATTCCCTGATGTTGTTAATTGCATGCAAACC
GACAACTTGGAACTCAAGAAGCTGGTATACTTGTACCTCATGAACTACGCCAAGTCCCAG
CCGGATATGGCTATCATGGCTGTTAACACATTTGTCAAGGATTGCGAGGACTCGAATCCT
TTGATCCGTGCTCTGGCTGTACGGACCATGGGTTGCATCCGAGTGGACAAGATCACGGAG
TACCTCTGTGAGCCCTTACGGAAGTGTCTCAAGGATGAAGACCCCTATGTCAGGAAGACG
GCTGCAGTGTGCGTCGCCAAACTGTACGACATATCACCCAGTATGGTGGAAGATCAGGGT
TTCCTCGATCAGTTAAAGGATCTGTTGAGTGACTCAAATCCTATGGTTGTAGCGAACGCT
GTCGCAGCTCTCTCTGAGATTAATGAGGCCAGTGTATCCGGACATCCGCTTGTAGAAATG
AACGCCCCAACCATTAACAAGCTGCTGACAGCCCTGAACGAGTGCACGGAGTGGGGTCAG
GTGTTCATACTGGACGCTCTTTCGAACTACTCCCCTCGTGATTCACGCGAGGCTCACTCT
ATATGCGAACGTATAACACCGCGTCTAGCCCACGCCAACGCCGCCGTCGTTCTGTCAGCC
GTCAAGGTCCTCATGAAGCTCATGGAGATGTTATCAGATGAGACGGAATTAGTGAGCACT
TTGTCCAGGAAGCTGGCTCCGCCCCTTGTGACGTTACTGAGTGCTGAGCCCGAAGTCCAA
TACGTAGCGCTACGGAACATAAACCTTGTGGTGCAGAAGAGACCGGATATATTAAAACAC
GAGATGAAGGTATTCTTCGTGAAGTACAACGATCCAATCTACGTGAAACTGGAAAAGCTG
GATATCATGATACGTCTGGCGTCTCAAGCGAACATCGCGCAGGTCCTGGGCGAGCTGAAG
GAGTACGCCACGGAGGTGGATGTGGATTTCGTGAGGAAGGCCGTCAGGGCCATAGGACGG
TGTGCCATTAAGGTGGAGCCTTCAGCGGAGCGTTGCGTGTCAACCTTACTGGAATTAATT
CAAACCAAAGTGAACTACGTGGTACAAGAGGCGATCGTTGTCATAAAGGACATATTCCGT
AAATATCCCAACAAATACGAGAGCATTATAAGTACGTTGTGTGAAAATTTGGACACACTC
GACGAGCCTGAGGCGAGAGCATCAATGGTTTGGATCGTGGGCGAGTACGCTGAGAGGATT
GACAACGCCGACGAGCTCCTCGACTCTTTCCTCGAAGGTTTTCACGATGAGAACGCCCAG
GTCCAGTTGCAGCTGTTAACAGCTGTTGTGAAGCTGTTCCTGAAGCGTCCAGCTGACACC
CAGGAGCTCGTGCAGCATGTATTGAGTCTAGCCACACAGGACTCGGACAATCCAGATCTC
AGGGACCGCGGGTTCATCTACTGGCGTCTGCTGTCAACGGATCCGGCTGCGGCTAAGGAG
GTGGTCTTGGCTGATAAGCCTCTGATCTCTGAAGAAACGGACCTCTTGGAGCCGACCTTG
CTAGACGAACTCATCTGCCACATAAGCTCGCTGGCGTCTGTGTACCACAAACCACCTACA
GCATTCGTCGAAGGTCGCGGCGCTCCACAGGCGTTCTCAGATGGTCGAGCGCCACACACC
GCGGACGAGGCGCCCGCGTCTGCGCCCGCTGTTATACCAAACCAGGAGTCCCTGATCGGT
GATCTACTGTCTATGGATATCGGGGCCCCGCCTGCAGCGGCGACCGCGCCAGCACTCGAC
TTACTGGCTGGAGGGCTGGACGTACTTCTGGGCGGTCCTGCCGACAGCCAGCCGACAGCC
AGCGTCTCTGGTAGCGCGACCGGTTTACTCGGAGACATCTTCGGAGCGACAGCACCCGCC
TCATACGTACCACCCAAGCAATGTTGGCTGCCGGCTGATAAGGGAAAAGGTCTGGAGATT
TGGGGTACATTCAGTCGCCAGAACGGTCAGCTTCGCATGGAGATGACGTTCACTAACAAA
GCCATGCAGGCTATGAGCGGGTTCGCCATACAACTCAATAAGAATAGTTTCGGCGTGTAC
CCTGGAGGCGCGCTGTCTGTTGGAGCGCTCGGGGCGGAGGGGCGGGGGCGCGAGCTGACG
CGCCTCTACCTCTGGCTACAGGCGGACCCGTTCAACGTGGCTGTCAAAAACAATATAGAC
GTATTTTACTTCGCGTGTCTCATTCCCGTTCACATCCTGTTCACTGAGGACGGACAGCTG
GACAAGCGAGTGTTCCTCACCACCTGGAAGGAAATCCCAGCTGCGAACGAGTTCCAGCAC
ACCATAACGAACGTCGTTGGCACCGCCGATTCGATCGCACAGAAAATGACCCTCAACAAT
GTTTTCACCATCGCTAAGAGGAACGTCGAGGGTCAAGACATGTTGTACCAGTCCCTCAAA
CTGACAAACAATATATGGGTCCTTCTAGAACTGAAGCTGCAACCCGGCAACCCAGAGGCC
ACGCTGAGCCTCAAGTCCCGCACCGTAGAGGTCGCTAATTGCATTTTCCAAGCTTACGAA
GCCATCATTAAATCGTAA
Protein sequence:
MTDSKYFTTTKKGEIFELKSELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITE
YLCEPLRKCLKDEDPYVRKTAAVCVAKLYDISPSMVEDQGFLDQLKDLLSDSNPMVVANA
VAALSEINEASVSGHPLVEMNAPTINKLLTALNECTEWGQVFILDALSNYSPRDSREAHS
ICERITPRLAHANAAVVLSAVKVLMKLMEMLSDETELVSTLSRKLAPPLVTLLSAEPEVQ
YVALRNINLVVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLGELK
EYATEVDVDFVRKAVRAIGRCAIKVEPSAERCVSTLLELIQTKVNYVVQEAIVVIKDIFR
KYPNKYESIISTLCENLDTLDEPEARASMVWIVGEYAERIDNADELLDSFLEGFHDENAQ
VQLQLLTAVVKLFLKRPADTQELVQHVLSLATQDSDNPDLRDRGFIYWRLLSTDPAAAKE
VVLADKPLISEETDLLEPTLLDELICHISSLASVYHKPPTAFVEGRGAPQAFSDGRAPHT
ADEAPASAPAVIPNQESLIGDLLSMDIGAPPAAATAPALDLLAGGLDVLLGGPADSQPTA
SVSGSATGLLGDIFGATAPASYVPPKQCWLPADKGKGLEIWGTFSRQNGQLRMEMTFTNK
AMQAMSGFAIQLNKNSFGVYPGGALSVGALGAEGRGRELTRLYLWLQADPFNVAVKNNID
VFYFACLIPVHILFTEDGQLDKRVFLTTWKEIPAANEFQHTITNVVGTADSIAQKMTLNN
VFTIAKRNVEGQDMLYQSLKLTNNIWVLLELKLQPGNPEATLSLKSRTVEVANCIFQAYE
AIIKS