| New model in OGS2.0 | DPOGS207022 |
|---|---|
| Genomic Position | scaffold1:+ 1040023-1041972 |
| See gene structure | |
| CDS Length | 858 |
| Paired RNAseq reads | 421 |
| Single RNAseq reads | 990 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012963 (4e-50) |
| Best Drosophila hit | mitochondrial ribosomal protein L44 (1e-54) |
| Best Human hit | 39S ribosomal protein L44, mitochondrial precursor (2e-44) |
| Best NR hit (blastp) | PREDICTED: similar to 39S ribosomal protein L44 [Acyrthosiphon pisum] (3e-75) |
| Best NR hit (blastx) | PREDICTED: similar to 39S ribosomal protein L44 [Acyrthosiphon pisum] (7e-72) |
| GeneOntology terms | GO:0005762 mitochondrial large ribosomal subunit GO:0003735 structural constituent of ribosome GO:0004525 ribonuclease III activity GO:0006396 RNA processing GO:0003723 RNA binding |
| InterPro families | IPR000999 Ribonuclease III |
| Orthology group | MCL14466 |
Nucleotide sequence:
ATGGAGTTAAAGCGTCGGGAAGACAAACAAGGTGGTAAAGTAACTAACCCAAGGAACACA
TTTTTGGAATGGAATTTAGAAGCGGAGTTGTATGCGTTTGGTAAGCGACTGAACGAAGAA
TTCGATTCGGATCTTTTGCTTCAAGCGTTTACCGACCGTTCATATGTAATTAAAGAAGAA
ATGAAACAAAAGGAATTGGAAATTGACCTCAAAATGAAAGACAATAGGGAGTTGGCTGAG
GAAGGGCGGAAGTTTATGCAAGAATATATTCAATTGTATTTGGAGACAGTGTTGCACAAA
CTACCAGAAGAGGGAATTATGTGTATAAGAAATCACCTGATTAGTGAAAAAGTAATTTCA
AATGTATCGTTGCACTTGGGAACAAAGGATATAATCTTAGCAGCTGAATATCCAGTCGAC
AATAGTATATTGGCAAAAACATTTGAGGCTATTGTTGGAGCTCTGCTACAATCGTCTGGA
GAGGAAAGAGCAGCACATTTTGTGAGAGATTTTGTCATCACACAACTCCAAGGTCAAGAT
GTAAATGAATTCTGGGAAATTGAAGATCCCTGGTCCATGCTCACCGAGATGATATCAAAA
ACTGGTGGGGTTTTAGAACCTAGACTAATTGGAGAGGTTGCTAAGAACACACTACTTGCA
TGCTACAGAGTGGGTCTTTATTTGGACAAGAAAATGATGTCAGCTGGCTTTGGTGAAACA
GTTGCTATTGCTAAGGAAATGGCGGCCAGAGAAGCGCTCAAAAAGATATTCGGCACAGAA
GAAACAATGCATCCCATAAACTTTAAGCTTAATGGCATACCTAAATCGAGGTCTCAAAGT
AAATTATCTGCAAGTTAA
Protein sequence:
MELKRREDKQGGKVTNPRNTFLEWNLEAELYAFGKRLNEEFDSDLLLQAFTDRSYVIKEE
MKQKELEIDLKMKDNRELAEEGRKFMQEYIQLYLETVLHKLPEEGIMCIRNHLISEKVIS
NVSLHLGTKDIILAAEYPVDNSILAKTFEAIVGALLQSSGEERAAHFVRDFVITQLQGQD
VNEFWEIEDPWSMLTEMISKTGGVLEPRLIGEVAKNTLLACYRVGLYLDKKMMSAGFGET
VAIAKEMAAREALKKIFGTEETMHPINFKLNGIPKSRSQSKLSAS