New model in OGS2.0 | DPOGS207039  |
---|---|
Genomic Position | scaffold1:+ 1365521-1372957 |
See gene structure | |
CDS Length | 924 |
Paired RNAseq reads   | 462 |
Single RNAseq reads   | 1847 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012979 (3e-08) |
Best Drosophila hit   | CG2663, isoform A (2e-32) |
Best Human hit | clavesin-2 (5e-13) |
Best NR hit (blastp)   | PREDICTED: similar to ENSANGP00000012173 [Nasonia vitripennis] (1e-38) |
Best NR hit (blastx)   | PREDICTED: similar to ENSANGP00000012173 [Nasonia vitripennis] (1e-35) |
GeneOntology terms    | GO:0008431 vitamin E binding GO:0005215 transporter activity GO:0005622 intracellular GO:0006810 transport |
InterPro families    | IPR001251 Cellular retinaldehyde-binding/triple function, C-terminal IPR001071 Cellular retinaldehyde binding/alpha-tocopherol transport IPR011074 Phosphatidylinositol transfer protein-like, N-terminal |
Orthology group | MCL40801 |
Nucleotide sequence:
ATGGCGTTTCTCGAAGGTCCTTCTCCAAAGCAGGAGGAATTTATTAAACAGGAACTCGGT
GAAGGTCCTGGGGATTTAGAAAGAGGTTTGAGGGACCTACACAGCATGTGCGCAGCCAAC
CCTTATCTGCCCCAACCCGAAGCCTTAGACACGAATCTATTGAAAACATTCCTACGGGGC
TGTCGCATGGACTTTGAAAGAGCGCGAAAAAAGTTAGAAACTTTTTGCTACTCGCGCTCA
AGATACAGAGACCTTTTCGAGCATCGTTCACTGAATGAACCACCATTGAATGACGTTTGC
AAATTCTTAGATATAGTGCCTCTTCCAAAACTTACGGACGAGGGTTTGAGAGTCACAATA
TTCAGGGTTCGTCCAAACTACCCTGAAAGTTCTTCTGATATACTGGCTGCTGTAAGAGCC
GTATTGCTCATATGTGATGTGAGATTAAGAGACGAGACGCTAATAGCTGGAGACGTATTC
ATTTGGGAGGCTACCCACGTGCGCGCGTCTATTGCTGCCCGCGTGGCCGCCGCAGCAGGA
GCGGTCCGCCGCAGTATACAGCTAGCGCAGGCCGCGTACCCGCAGAGAATGCGCCGCATT
CACGTCGTCGGCGCGCCCGCACTCGTCGCCTCCTCACTCAACCTCATGAGAGCATGTGTC
AACGAGAAAGTTAGGAAACGATATTATCTACACGACAAGACAGAGGAGCTTCTAGAGCAC
ATCCCAGCAAGAGTATTGCCAGTTGAATGGGGAGGCGAAGAGGAATCGATTGAGGTGTTA
AATAGGAAATGGAGACGCCGCGTCGATGAAATGCGCGACTATCTTAGAGACCTCAGCGAG
CTGTGTGACGTCACCCCGGACACGCTCTACGACAACGACATCTATGGCGCAGTAGGATCG
TTCAGGAAACTGGACATTGATTAG
Protein sequence:
MAFLEGPSPKQEEFIKQELGEGPGDLERGLRDLHSMCAANPYLPQPEALDTNLLKTFLRG
CRMDFERARKKLETFCYSRSRYRDLFEHRSLNEPPLNDVCKFLDIVPLPKLTDEGLRVTI
FRVRPNYPESSSDILAAVRAVLLICDVRLRDETLIAGDVFIWEATHVRASIAARVAAAAG
AVRRSIQLAQAAYPQRMRRIHVVGAPALVASSLNLMRACVNEKVRKRYYLHDKTEELLEH
IPARVLPVEWGGEEESIEVLNRKWRRRVDEMRDYLRDLSELCDVTPDTLYDNDIYGAVGS
FRKLDID