New model in OGS2.0 | DPOGS207042  |
---|---|
Genomic Position | scaffold1:+ 1397806-1403808 |
See gene structure | |
CDS Length | 2181 |
Paired RNAseq reads   | 1289 |
Single RNAseq reads   | 3776 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012983 (0.0) |
Best Drosophila hit   | Dead-box-1 (0.0) |
Best Human hit | ATP-dependent RNA helicase DDX1 (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to Dead-box-1 CG9054-PA isoform 1 [Apis mellifera] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to Dead-box-1 CG9054-PA isoform 1 [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0008026 ATP-dependent helicase activity GO:0006446 regulation of translational initiation GO:0042254 ribosome biogenesis GO:0001700 embryonic development via the syncytial blastoderm GO:0000245 spliceosome assembly GO:0004386 helicase activity GO:0005575 cellular_component GO:0005524 ATP binding GO:0003676 nucleic acid binding |
InterPro families    | IPR014001 DEAD-like helicase IPR018355 SPla/RYanodine receptor subgroup IPR001650 Helicase, C-terminal IPR001870 B302/SPRY domain IPR014014 RNA helicase, DEAD-box type, Q motif IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal IPR003877 SPla/RYanodine receptor SPRY IPR008985 Concanavalin A-like lectin/glucanase |
Orthology group | MCL14919 |
Nucleotide sequence:
ATGACTGCATTTGAGGAATTTGGAATGCTTCCTGAACTAGGGAAGGCGATAGATGAAATG
GAATGGACCCTTCCTACCGACGTACAAGCTGAGGCAATTCCTCTTATTCTTGGTGGTGGA
GACGTTCTTATGGCAGCCGAGACTGGTAGTGGTAAAACCGGCGCTTTTTGTCTGCCAATA
CTTCAGATAGTTTGGGAAACATTAAAAGATATTCAAGATGGTAAAACTAGTAGAATAATA
CAGGCTGTATCAGGAGAGTGTACAATGTCTTTCTTTGATCGTACTGAGGCTCTAGCTGTC
ACTCCAGATGGATTGCGATGTCAGTCTAGACATTTTAATGCATGGCATGGATGCAGAGCC
ACTAAAGGTATACATACTAAAGGTGTCTATTATTATGAAGCTACTGTCACTGATGAAGGA
TTGTGCCGTGTTGGCTGGTCAGCACCAGGTGCTAACCTGGATCTTGGGACAGACCGGCTT
GGTTTTGGATTTGGTGGCACTGGGAAAAAATCAAATTGTAAACAATTTGATGACTATGGA
GAGGCTTATGGCAAGAATGATGTAATTGGTTGTCTACTTAATCTAAACAATGGTGATATA
CGTTTTTACAAGAATGGTCAAGATTTGGGGTTGGCATTTAAACTGGATCAGTCTCGTAGA
TCAGACTGTTATTTCCCAGCCGTGGTGCTGAAGAATGCGGAAATAAGTTTTAATTTTGGC
AACACACCCTTTAAGTATCCACCTAACTGTGAATACATTGCTATAGCAAATGCTCCAAGA
GAATATGTCAAAAACAACCCAGTTTGTTCTGTGGCATGTGAAGGAGCAAAACAAGTCAAT
AATGCACCCCAGGCTATTATAATTGAGCCATCACGAGAGTTAGCAGAACAAACATGCAAT
CAGATTACACTGTTCAAGAAGTATATAGATAATCCAAAAATAAGAGAGCTTTTAGTCGCG
GGCGGTATAAATGTGAAGGATCAAATAAGTCAACTCAATGCTGGTATAGACATTGTTGTT
GGCACACCCGGCAGGATTGAAGATCTCATTCAAGGAGGCTACCTGGCGCTAACCCACTGT
CGGTTCTTTGTGCTGGATGAGGCTGATGGGTTGCTCAAGTCTGGTTGCGGCGACATGATC
GAACGTCTCCATAGACAGATACCGAAGGTCACTTCAGACGGGAGACGCCTCCAGATGGTT
GTCTGCTCTGCTACATTACACGCTTTCGAAGTTAAGAAAATGGCGGAAAAACTAATGCAT
TTCCCCACATGGGTGGATCTGAAAGGCGAAGATTCAGTGCCGGAGACAGTTCATCATGTC
GTGGTGAATGTTGATCCACAGGAAGACAAATCCTGGGAGACAGCACAGAAAAAAATACTG
ACCGACGGTGTTCATGCCAGAGACAATATAGATAACATGTCGCCAGAGACCCTGTCGGAG
GCTGTTAAGGTACTCAAAGGAACGTACTGTGTACGAGCCATCAGAGCACACAAGATGGAC
AGAGCCATAATCTTCTGCCGTACGAAGCTGGACTGTGATAACATGGAGCGGTTCTTGAAG
TCTTTCGGTGAAGACTTCTCTTGTGTATGTCTTCACAGTGATAGAAAACCCAAGGAGAGG
AAAGAAAACCTTGAGATGTTCAAACAGAGCCGCGTCAAATTTCTCATATGTACAGACGTA
GCGGCTCGAGGAATCGATATATCCGGATTGCCTTTTATGATAAACATTACTCTACCTGAT
GAGAAGTCGAACTACGTTCATCGCATTGGTCGTGTTGGTAGAGCTGATCGTATGGGTCTG
GCCATAAGTCTGGTCGCCACTGTACCCGAAAAGGTGTGGTATCACGGTGAGTGGTGTTCC
TCCCGCGGCCGGAACTGTTGGAACACAAATTTGAAGGACGAACGGCCAAAAGGCTGCTGT
ATGTGGTACCAGGAATCCCAGTATCTAGCCGACATTGAGGATCATTTGAATGTTACCATA
CAACAAATTGAGACTGACATGGTTGTTCCGTGCAATGAGTTTGATGGTAAGGTGGTATAT
GGACAGAAGAGGAAACAGATGAGCTCAGGGTATCAGGATCATGTCAGTCAGATGGCGCCA
AAGGTGCGGTCGTTGAAGGAATTAGAATCACAGGCTCAGGTGTGCTATTTAAGGATTCAT
TATAACGTCGATGTTATGTAA
Protein sequence:
MTAFEEFGMLPELGKAIDEMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQIVWETLKDIQDGKTSRIIQAVSGECTMSFFDRTEALAVTPDGLRCQSRHFNAWHGCRA
TKGIHTKGVYYYEATVTDEGLCRVGWSAPGANLDLGTDRLGFGFGGTGKKSNCKQFDDYG
EAYGKNDVIGCLLNLNNGDIRFYKNGQDLGLAFKLDQSRRSDCYFPAVVLKNAEISFNFG
NTPFKYPPNCEYIAIANAPREYVKNNPVCSVACEGAKQVNNAPQAIIIEPSRELAEQTCN
QITLFKKYIDNPKIRELLVAGGINVKDQISQLNAGIDIVVGTPGRIEDLIQGGYLALTHC
RFFVLDEADGLLKSGCGDMIERLHRQIPKVTSDGRRLQMVVCSATLHAFEVKKMAEKLMH
FPTWVDLKGEDSVPETVHHVVVNVDPQEDKSWETAQKKILTDGVHARDNIDNMSPETLSE
AVKVLKGTYCVRAIRAHKMDRAIIFCRTKLDCDNMERFLKSFGEDFSCVCLHSDRKPKER
KENLEMFKQSRVKFLICTDVAARGIDISGLPFMINITLPDEKSNYVHRIGRVGRADRMGL
AISLVATVPEKVWYHGEWCSSRGRNCWNTNLKDERPKGCCMWYQESQYLADIEDHLNVTI
QQIETDMVVPCNEFDGKVVYGQKRKQMSSGYQDHVSQMAPKVRSLKELESQAQVCYLRIH
YNVDVM