New model in OGS2.0 | DPOGS207047  |
---|---|
Genomic Position | scaffold1:+ 1525654-1532684 |
See gene structure | |
CDS Length | 489 |
Paired RNAseq reads   | 12 |
Single RNAseq reads   | 84 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA003208 (9e-34) |
Best Drosophila hit   | Lim1 (1e-58) |
Best Human hit | LIM/homeobox protein Lhx5 (1e-50) |
Best NR hit (blastp)   | lim1 [Tribolium castaneum] (3e-62) |
Best NR hit (blastx)   | lim1 [Tribolium castaneum] (4e-61) |
GeneOntology terms    | GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0007480 imaginal disc-derived leg morphogenesis GO:0007479 leg disc proximal/distal pattern formation GO:0043565 sequence-specific DNA binding GO:0008270 zinc ion binding GO:0045941 positive regulation of transcription GO:0016481 negative regulation of transcription |
InterPro families   | IPR001781 Zinc finger, LIM-type |
Orthology group | MCL11339 |
Nucleotide sequence:
ATGGCCTGTGCTGGTTGCGAGAAGCCTATCCTGGACAAGTTCCTCCTGCATGTGTTGGAG
CGCGCGTGGCACGCAGCCTGCGTCCGTTGCGCCGATTGCAGGGCCCCACTGGCGGACAAG
TGCTATTCCAGGGACAATAAACTGTTCTGTCGTAATGACTTCTTCAGACGCTACGGCACT
AAATGCAGCGGCTGCGGCCACGGCATATCTCCATCAGACTTGGTCCGGAAAGCGAGAGAG
AAGGTCTTCCATCTCAATTGCTTCACCTGCCTCGTCTGCAGGAAGCAACTGTCCACTGGC
GAGGAGCTTTACGTTCTGGATGACAACAAGTTTATATGCAAAGAGGATTACTTAGCTGGC
AAGGCGCCGACGCAGCACCACGTAAACAGAACCATTGGAGCGTGGAGATTGGTGCCGGGG
TATTTCAGACCCTGCGGCCCGGGGATAAGGTCTATCGCGTCGGATCGGGAGGCGAAGTAC
GTGGAATGA
Protein sequence:
MACAGCEKPILDKFLLHVLERAWHAACVRCADCRAPLADKCYSRDNKLFCRNDFFRRYGT
KCSGCGHGISPSDLVRKAREKVFHLNCFTCLVCRKQLSTGEELYVLDDNKFICKEDYLAG
KAPTQHHVNRTIGAWRLVPGYFRPCGPGIRSIASDREAKYVE