| New model in OGS2.0 | DPOGS207048 |
|---|---|
| Genomic Position | scaffold1:+ 1544256-1548513 |
| See gene structure | |
| CDS Length | 528 |
| Paired RNAseq reads | 13 |
| Single RNAseq reads | 68 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012987 (8e-41) |
| Best Drosophila hit | Lim1 (4e-31) |
| Best Human hit | LIM/homeobox protein Lhx1 (2e-18) |
| Best NR hit (blastp) | PREDICTED: similar to Lim1 CG11354-PA [Acyrthosiphon pisum] (4e-38) |
| Best NR hit (blastx) | PREDICTED: similar to Lim1 CG11354-PA [Acyrthosiphon pisum] (7e-36) |
| GeneOntology terms | GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005634 nucleus GO:0007480 imaginal disc-derived leg morphogenesis GO:0007479 leg disc proximal/distal pattern formation GO:0043565 sequence-specific DNA binding GO:0008270 zinc ion binding GO:0045941 positive regulation of transcription GO:0016481 negative regulation of transcription |
| InterPro families | IPR001356 Homeobox IPR009057 Homeodomain-like IPR012287 Homeodomain-related |
| Orthology group | MCL11339 |
Nucleotide sequence:
ATGAAAGGAAAATCCGGAGACAACGGCACATCTCTCCCGAAACTTCCGAGCGGTTTTGTC
GATCGTTTATCGAACTTATCGAAAATTTCCTCACCAGCGGATTCCCTCCTCGGCTCAGGC
TCTGACGAAGAGGAGGAAGAAGAATCCCGTGCGGGGAACAACTCTAGCAGCCCCGCTCAC
GCTCCCCACCCAGCCTTGCACCCAGACCTCTCGCATAACGGGGATGCCAAACCTCATGAG
GACTCAGAGGACCAGGGTTCGTTAGACGGCGATCCGGAGACCAGGGATTCGCAAGCTGAG
AACAAGTCACCAGACGACGGAAATGGCGGCTCCAAGAGGAGAGGTCCAAGGACGACAATA
AAAGCCAAGCAGCTGGAGATACTGAAATCTGCCTTCTCACAGACACCGAAGCCAACGAGG
CATATCCGGGAACAGCTGGCCAAGGAAACTGGATTACCGATGAGGGTCATACAGCAACCG
GTCAATCAGGCTCCAATCTATAGAAACGTCGGGATCCAAGTTGAATGA
Protein sequence:
MKGKSGDNGTSLPKLPSGFVDRLSNLSKISSPADSLLGSGSDEEEEEESRAGNNSSSPAH
APHPALHPDLSHNGDAKPHEDSEDQGSLDGDPETRDSQAENKSPDDGNGGSKRRGPRTTI
KAKQLEILKSAFSQTPKPTRHIREQLAKETGLPMRVIQQPVNQAPIYRNVGIQVE