New model in OGS2.0 | DPOGS207055  |
---|---|
Genomic Position | scaffold1:+ 1769188-1771440 |
See gene structure | |
CDS Length | 1875 |
Paired RNAseq reads   | 354 |
Single RNAseq reads   | 942 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013001 (0.0) |
Best Drosophila hit   | CG9514 (0.0) |
Best Human hit | choline dehydrogenase, mitochondrial precursor (8e-82) |
Best NR hit (blastp)   | PREDICTED: similar to ENSANGP00000015188 [Nasonia vitripennis] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to ENSANGP00000015188 [Nasonia vitripennis] (0.0) |
GeneOntology terms    | GO:0008812 choline dehydrogenase activity GO:0050660 FAD binding |
InterPro families    | IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal IPR012132 Glucose-methanol-choline oxidoreductase |
Orthology group | MCL10046 |
Nucleotide sequence:
ATGTTAGCAGCCCTCGCATATTTCCATTACGACTTGCTGGACCCGGAAAACAGACCATTC
AATCAAAAATACCTCAGAGAAGAATACGACTTTGTAATAATCGGAGGCGGTTCTGCTGGA
GCAGTGCTAGCGAATAGATTAACAGAAGTAGAGGGCTGGAATGTACTACTACTGGAAGCT
GGGGGTCACGAAACGGATATTAGTGACGTGCCATTATTATCTTTGTATCTGCACAAAAGC
AAATTAGATTGGAAATATCGAACTCAACCACAAGATTCGGCGTGTCAGGCAATGATTGAT
AAGAGGTGCAGTTGGACGAAGGGGAAGGTTCTCGGCGGTTCATCAGTACTCAACACAATG
CTTTACATCCGAGGAAACAAACGAGACTTTGACCAATGGGAATCATTCGGTAACCCGGGC
TGGGGTTACGAAGACGTCTTACCTTACTTTAAGAAATCGGAAGATCAACGGAACCCCTAT
TTGGCGAAAGATACAAAATATCACTCCACGGGTGGATATCTCACGGTTCAAGACGCACCA
TATAATACGCCCATCGGAGCAGCGTTTCTTCAGGCTGGTGAAGAAATGGGTTATGACATA
TTGGATATTAATGGTGCCCAGCAAACAGGTTATGCTTGGTACCAATTTACTATGAGACGA
GGAACAAGATGTTCTACGGCTAAAGCTTTCTTGAGACCTGTGCGAGTACGACAAAATCTT
CACATTGCTCTTTTTTCTCATGTTACAAAAGTTTTGATAGACAAAGATAAGAAAAGAGCT
TATGGCGTAGAGTTCTTTAGAGATGGAATCAAACAGGTCGTTTATGCAAAACGAGAGGTA
ATTCTGGCTGCAGGAGCAATTGGATCTCCACAATTACTCATGCTTTCTGGTATTGGACCA
GCTCAACATTTGGAAGAAGTGGGTATTGATGTTGTCTACAATTCCGCTGGAGTGGGAAGA
AATTTACAAGATCATATCGCCGTAGGAGGTATAGTTTTTCAAATCGATTATCCTATAAGC
ATCGTTATGAATAGACTTGTGAACATTAATTCAGCTTTACGCTACGCTGTTACGGAAGAT
GGACCATTAACTTCAAGCATTGGCTTAGAAGTTGTAGCCTTTATTAATACTAAATATGCT
AATGAAACTGAAGATTGGCCAGACATTGAGTTCATGATGACATCTGCATCTATACCTTCG
GATGGGGGGACACAAGTTAAAGTTGCTCACGGCATAACTGATGAGTTCTATGAAGAAGTT
TTTGGTCATCTAACTAGTAAGGACGTCTGTGGAATATTTCCCATGATGTTGAGACCAAAA
AGTCGGGGCTTTATAAAATTAAGATCTAAAAATCCCTTAGATTATCCATTGATGTACCAT
AATTATTTGACGCACCCCGATGATGTTGGAGTAATGAGAGAAGGTGTAAAAGCCGCCGTA
GCTGTAGCTGAAACAGCAGCCATGAAGCGTTTGGGTGCTAGATATAACAGTAAACCTGTC
CCAAATTGCAAACATTTACCTCTATACACGGATGAATACTGGGAATGCTATATACGCCAG
TATACCATGACAATTTATCATTTGTCTGGCACAGCTAAGATGGGCCCATCAAGTGATCCT
ATGGCCGTGGTGGATCCTGAATTACGTGTTTATGGTGTCGAAGGCTTGCGTGTCATTGAT
GCAAGTATAATGCCAGCTGTTACCAATGGTAATATTAATGCTCCAGTAATTATGATTGCA
GAAAAAGGCTCAGATCTAATTAAAAATACTTGGAAGCCAAAACAAAAAAGTAGAAGCCGT
AGATCTTCGAAATGTTCCAAATTGGAGCAAATTCTGAAGATAGAACGAACTTCACAATGC
CAGAAAGAAAGATGA
Protein sequence:
MLAALAYFHYDLLDPENRPFNQKYLREEYDFVIIGGGSAGAVLANRLTEVEGWNVLLLEA
GGHETDISDVPLLSLYLHKSKLDWKYRTQPQDSACQAMIDKRCSWTKGKVLGGSSVLNTM
LYIRGNKRDFDQWESFGNPGWGYEDVLPYFKKSEDQRNPYLAKDTKYHSTGGYLTVQDAP
YNTPIGAAFLQAGEEMGYDILDINGAQQTGYAWYQFTMRRGTRCSTAKAFLRPVRVRQNL
HIALFSHVTKVLIDKDKKRAYGVEFFRDGIKQVVYAKREVILAAGAIGSPQLLMLSGIGP
AQHLEEVGIDVVYNSAGVGRNLQDHIAVGGIVFQIDYPISIVMNRLVNINSALRYAVTED
GPLTSSIGLEVVAFINTKYANETEDWPDIEFMMTSASIPSDGGTQVKVAHGITDEFYEEV
FGHLTSKDVCGIFPMMLRPKSRGFIKLRSKNPLDYPLMYHNYLTHPDDVGVMREGVKAAV
AVAETAAMKRLGARYNSKPVPNCKHLPLYTDEYWECYIRQYTMTIYHLSGTAKMGPSSDP
MAVVDPELRVYGVEGLRVIDASIMPAVTNGNINAPVIMIAEKGSDLIKNTWKPKQKSRSR
RSSKCSKLEQILKIERTSQCQKER