New model in OGS2.0 | DPOGS207071  |
---|---|
Genomic Position | scaffold1:+ 2054124-2084019 |
See gene structure | |
CDS Length | 4284 |
Paired RNAseq reads   | 11198 |
Single RNAseq reads   | 26357 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013025 (0.0) |
Best Drosophila hit   | eIF3-S10 (0.0) |
Best Human hit | eukaryotic translation initiation factor 3 subunit A (0.0) |
Best NR hit (blastp)   | PREDICTED: similar to eukaryotic translation initiation factor 3, theta subunit [Tribolium castaneum] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to eukaryotic translation initiation factor 3, theta subunit [Tribolium castaneum] (0.0) |
GeneOntology terms    | GO:0003743 translation initiation factor activity GO:0005852 eukaryotic translation initiation factor 3 complex GO:0006446 regulation of translational initiation |
InterPro families    | IPR000717 Proteasome component (PCI) domain IPR004302 Chitin-binding, domain 3 |
Orthology group | MCL14547 |
Nucleotide sequence:
ATGGCGAGATACGGTCAGAGACCGGAAAATGCTCTTAAGAGAGCCAATGAGTTTATGGAC
TTGGAGAAGCCTGCAAGGGCGCTTGATACCTTGCAGGAAGTGTTTCGAAACAAAAAATGG
GCTTACAATTGGTCCGAATCTGTCTTAGAACCGATCATGTTCAAATACCTGGAACTATGC
GTCGATTTACGCAAGTCTCATATTGCCAAAGAAGGGCTGTTTCAATACAGAAACATGTTT
CAATCAGTAAACGTTGGTTCATTAGAACAAGTTATCAGGGGATATCTCCGGATGGCTGAA
GAGCGTACAGAGTCTGCTCGAGAACAATCCACCCAGGCAGTAATTGACACAGATGATCTT
GATAACCTTGCAACACCTGAGAGTATTTTGCTAAGTGCTGTCTCAGGGGAAGATGCCCAG
GACCGCTCTGATAGAACAATATTAACACCATGGGTGAAATTTCTTTGGGAGTCCTACTGC
CAGTGTCTGGAGCTCCTGCGGACGAATGCACATGTGGAGACCCTATACCATGACATAGCT
CGCATGGCATTCCAGTTCTGCTTGAAGTATTCAAGGAAGACTGAGTTTAGGAAGCTTTGT
GATAAACTCAGAAAACATCTTGATGATATTTGCAAATCCGTGTCTCAGCCAGGCAATGTT
AGTATCAGTAAGCCTGAAACACAGCAGCTCAACTTGGAAACCAGATTGTTCCAACTGGAC
AGTGCCATTCAGATGGAGCTGTGGCAAGAAGCCTACAAAGCAATAGAAGACATCCATAAT
CTCATGAACATGTCCAAGAAGACGCCAGTCGCCAAAACCATGGCTAATTATTATGGCAAG
CTGGCTCTCGTCTTTTGGAAGGCTGGACATTGCTTGTTCCATGCAGCTGCCCTGTTAAAG
CTTTTCCAACTGTCTAGAGAAATGAAGAAAAATATCACTCAGGAGGAATTGCAAAAGATG
GCATGTCGAGTCTTGGTGGCTGTGCTATCGGTCCCCTTACCATCGCTTCATCCTGAGTTC
GATCGTTTCGTTGAAACTGACAAGAGTCCTGTTGAGAAGGCACAGAGATTAGCAGTGTTG
CTTGGACTCGCTCAACCTCCGACCAGAGCTAGCTTACTGAAAGACGTGGTCCGTATGAAC
GTGGTGTCGCTGGCGTCGCCACAGCTGCAGCAGCTGTACTCGTGGCTCGAGGTGGAGTTC
GATCCCCTGTCCATCTGTCAGAACGTCCAGAGCGTCGTCAGAACACTGCAGGAGGATCCT
AACTCCCCGCTGGCACAATACTCGGTGGCTATAACGGATGTAGCGCTGGTACGTCTCATT
CGTCAAGTCGCTCAGTGCTACGCCTGCATTCAATTCTCCAGACTGTTGGAGCTGGCTGCC
ACCGACGACCTCTTCCATATCGAACGTCTGCTCGTCGACTGTGTCCGCCATAATGATATG
CAGATACGGGTGGATCATGCTAACAAATGTGTCCACTTCGGCGTGGAAGCTGGAGGCGGT
GAATGGTGTTCTACTGCTGACGAGGCGTGCGGCGGGGCCATACTCCAGGCAACGCCCGCT
GAACAGGTTCGCGAGCAGCTCGTCCGTGCTGCGGAGGTAGTTTCTCGTGCTGCTCAGACA
TTGTTCCCAGCTCGTCGTCGTGCCGATCGCGAGCGTGCTAGGGCCGCCATGGTGCAGCAC
TATCACGAGAACAAACACGCTGAACATCATCGCGTTCTACAAAGACATAAGATCATAGAG
GAGAGGAAGGAGTACATTGAGAGACTCAACACTGTCAGGGAGGAAGAGGAGTTGCGCCGT
CAAGAAGAGCAGTTGCGCGCAGCAGCGGCAGCGGAGGCACGCCGTCAAGAACAGGAAAGA
GAAGAGAGGGAGAAGAGGAGACACGCCTCGGAACTAGCAGCAATGAAGGAGAGGAATCTG
AGGGAGAGAATCGCTCACATCTCACAGACTATGCACGGGAAGAAGGTGCTGCAAAAGTTG
GATGAGGAGGATTTGAAGAAAATGGACGCCGAAGCCATTGCTCAACGCGAGGCCGAAGAA
CTGATGAAGGAACGTCGGGAGCTTGCAGCTCGTCTTAAGTCTCAAGAGAAGAAGGTTGAT
TACTTCGAGCGGGCCAAGCGTCTGGAGGAGATTCCACTCCTACAGAAGAGTTTGGAAGAG
AAGCAAGTGCAGGATAAAGCATTCTGGGAACAGCAGGAGAAGGAACGCATCGCCCAACTC
ATCGAGGCGCGTGGCCGTGATGTAGCTACAGCAACACGTCTGTCTCGTATGTCGGTGCAC
CGCGAACAGTTCACGACTCGACTGAACAGCGAGCGTGGCGCATTGTACCACAGCAGGCTG
GCAGAGTTCACCGAAACCATCACCAGGGAGAGGGAGGCGCGACTCGCTCATAGGAGACAG
CAGAGGATCGAGAAGAGACGAACAGAGTGGCTGACGGAGAAGCGTCGCATGGAAGAGCGT
GCTGCGGAGGAAGCTCGCAAGGCACAGGAGGAACATGAGAGGAGGGAGAAGGAGAGAAAG
CAGGCGGAGGAACTGGCCGCCCTCAAGGAGAAGAAGGAGAAGTCACTCAAGGAGCATCAA
GAAATGTTGGCTAGGGCTGAAGCAAAGGCTCGCGCTATGGAAGCTGAAGTCACCCGCAAG
CTAGAGGAACAAAAAGCGGCCGCGTTGTCCAGCTGGAGGAGACCCGGACCTCCGGCCAAG
GAACCAGAGAAGAAGGAACCCTGGCGGCCCAGTCGCCTTCGCGAGCCCGTTGCTGATGAA
CGTCCACGCTCTCCAGGACGTAGAGATGAAGAGAAACGCGAGGAAAGACCTCGCGATATT
AGCTTCAAGGATGACAGGCCAAGAGAAGAACGCAGCTACAGGGACGATAAGAACAGGGAT
GATCGGCCGAGAGATGACTCTGGATGGCGTTCAGCTAACCGGGATGCAGACCGGGATAGG
GATAGAGAAAGACCGCGCTACACCGGTCGTTCAAGCGGCCCCGAGTCCGGCAGCTGGCGT
CGTGGCCCTTCAGACCCAGCGCCCTCCGCCGAGCGTTCGTCAACTTGGCGCACCAAGGAG
GCGTCTCGTGACGACCGTCGTGATGACCGCCGTGATGACCGCCGTGATGATCGTCGTGAT
GACCGCCGTGATGACCGCTACCGTGATCCGCCGCGTGATCGTGATGGATATCGTGATAGA
CCGCCGCCACGACGCGACGAGCGTGATCCGCCTCGTAGAGATGATCGTGATCGCCGCGAT
GATCGCGAACGTCGCGTGCCCCCGCGCAGAGAGGACAAACCCCGTGACCCGGACGACTTC
CAAACCATATTATGGTATGGCCTCGCAATCCTGGTTTTACTTGAAAAAGGCGTATACGGA
CATGGAAGGCTGATAGAACCACCGTCACGGGCGTCAGCGTGGCGCTATGGGTTTGACACT
CCACACAACTACAACGACCACGAGTTATATTGTGGTGGTTTCACAAGACAATGGAACAAG
AATGGAGGCAAATGTGGTGTATGTGGGGATGCCTGGGACTCGCCTAAGCCTCGGGCCCAC
GAGCTCGGCGGCAGATTTGGGCAAGGCGTGATAGTGAGAAAATACGCACCAAAAGATGTA
ATCGTCATCAAAGTCGAACTTACAGCTAGCCACAATGGTTTCTTTGAATTCAGAGTATGC
GACAAACTCAAAGACACTGATCAGGAATGCATGGACAAACACGTCCTGAACTTGGAAGGA
AAGAGTGACACCAGATACTATCCTCGTGAAGGTAACAAGATTTATGAAATGAAATATCAG
CTTCCGGAGGGTCTGGAATGTACTCATTGCGTACTACAGTGGAAGTATATTGCTGGTAAT
AACTGGGGAACGTGTGCAAATGGTACTGGGGCTGTTGGTTGTGGACCGCAGGAAGAGTTT
CGAGCGTGCGCCGATATAGCCATAGGTGATCGCTTTACCACCACCACCAGGAGGCCGAGA
CCGACATATGTCCCACCGAACAGGACTCCGAAGGTCCCGACTCCTGAACAATCAGAATCT
TCTGGAAGCGCTTGGTTCGGAGTTATTATCGCAATCATCACACTGTTCATCGCTATTGCG
GTATTGGCCGGAATATACTTGTACTATTACAGAGGTGGCATGAGGATCAAGAACCTTTTG
AAATCCAAAGGGGCTCCTCCAGCGCCTGTTCCACCTCCGAGACATAAAAGATCTTCTCTG
TCTAGAGAAAACCCACCAGAAATCTCATCCCCGAAAGGAATCTCCGAGTCCGGATTCGAA
ACAGTAGACTTAAGGTCAAAATAA
Protein sequence:
MARYGQRPENALKRANEFMDLEKPARALDTLQEVFRNKKWAYNWSESVLEPIMFKYLELC
VDLRKSHIAKEGLFQYRNMFQSVNVGSLEQVIRGYLRMAEERTESAREQSTQAVIDTDDL
DNLATPESILLSAVSGEDAQDRSDRTILTPWVKFLWESYCQCLELLRTNAHVETLYHDIA
RMAFQFCLKYSRKTEFRKLCDKLRKHLDDICKSVSQPGNVSISKPETQQLNLETRLFQLD
SAIQMELWQEAYKAIEDIHNLMNMSKKTPVAKTMANYYGKLALVFWKAGHCLFHAAALLK
LFQLSREMKKNITQEELQKMACRVLVAVLSVPLPSLHPEFDRFVETDKSPVEKAQRLAVL
LGLAQPPTRASLLKDVVRMNVVSLASPQLQQLYSWLEVEFDPLSICQNVQSVVRTLQEDP
NSPLAQYSVAITDVALVRLIRQVAQCYACIQFSRLLELAATDDLFHIERLLVDCVRHNDM
QIRVDHANKCVHFGVEAGGGEWCSTADEACGGAILQATPAEQVREQLVRAAEVVSRAAQT
LFPARRRADRERARAAMVQHYHENKHAEHHRVLQRHKIIEERKEYIERLNTVREEEELRR
QEEQLRAAAAAEARRQEQEREEREKRRHASELAAMKERNLRERIAHISQTMHGKKVLQKL
DEEDLKKMDAEAIAQREAEELMKERRELAARLKSQEKKVDYFERAKRLEEIPLLQKSLEE
KQVQDKAFWEQQEKERIAQLIEARGRDVATATRLSRMSVHREQFTTRLNSERGALYHSRL
AEFTETITREREARLAHRRQQRIEKRRTEWLTEKRRMEERAAEEARKAQEEHERREKERK
QAEELAALKEKKEKSLKEHQEMLARAEAKARAMEAEVTRKLEEQKAAALSSWRRPGPPAK
EPEKKEPWRPSRLREPVADERPRSPGRRDEEKREERPRDISFKDDRPREERSYRDDKNRD
DRPRDDSGWRSANRDADRDRDRERPRYTGRSSGPESGSWRRGPSDPAPSAERSSTWRTKE
ASRDDRRDDRRDDRRDDRRDDRRDDRYRDPPRDRDGYRDRPPPRRDERDPPRRDDRDRRD
DRERRVPPRREDKPRDPDDFQTILWYGLAILVLLEKGVYGHGRLIEPPSRASAWRYGFDT
PHNYNDHELYCGGFTRQWNKNGGKCGVCGDAWDSPKPRAHELGGRFGQGVIVRKYAPKDV
IVIKVELTASHNGFFEFRVCDKLKDTDQECMDKHVLNLEGKSDTRYYPREGNKIYEMKYQ
LPEGLECTHCVLQWKYIAGNNWGTCANGTGAVGCGPQEEFRACADIAIGDRFTTTTRRPR
PTYVPPNRTPKVPTPEQSESSGSAWFGVIIAIITLFIAIAVLAGIYLYYYRGGMRIKNLL
KSKGAPPAPVPPPRHKRSSLSRENPPEISSPKGISESGFETVDLRSK