New model in OGS2.0 | DPOGS207090  |
---|---|
Genomic Position | scaffold1:+ 2434896-2436024 |
See gene structure | |
CDS Length | 891 |
Paired RNAseq reads   | 256 |
Single RNAseq reads   | 849 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA013054 (6e-108) |
Best Drosophila hit   | CG33786 (2e-49) |
Best Human hit | yrdC domain-containing protein, mitochondrial precursor (4e-38) |
Best NR hit (blastp)   | ischemia/reperfusion inducible protein [Bombyx mori] (5e-86) |
Best NR hit (blastx)   | ischemia/reperfusion inducible protein [Bombyx mori] (2e-83) |
GeneOntology terms    | GO:0045182 translation regulator activity GO:0006412 translation GO:0003677 DNA binding GO:0030528 transcription regulator activity GO:0008270 zinc ion binding GO:0003899 DNA-directed RNA polymerase activity GO:0045449 regulation of transcription |
InterPro families    | IPR017945 DHBP synthase RibB-like alpha/beta domain IPR006070 Sua5/YciO/YrdC, N-terminal IPR004388 Sua5/YciO/YrdC/YwlC |
Orthology group | MCL14811 |
Nucleotide sequence:
ATGGTTGAAGAAGCTTTTGAATCATCACTACGGTATGGTTGTAATACTTGCCCCTATATA
TACAATATACGGAGGAAAGTCTCGTCGCGCACATTCCCAAAATTAAAGGAATTAGATTAT
ATCATGGGTGGTGCTGCTGCATGGGAGAATGTAGATTCAACCGATGCTGTGTGCCCAAAG
TGTGCTTATGTGAGGTATAAAAGTGTGATGTCAACTATGAAAATTGATAAAATGGCATCA
ATATTTCCCTGTGATGATGTGTCGTCATATGTTAAAGCGGCAGAATACCTTGAAAAAGGA
GAGGTTATAGCTGTGCCAACAGACACAATTTATGGGCTCGCTTGTAGTGCTAAATGTCCA
GAAGCAATAAAAAAGCTTTATACAATTAAAGGCAGAGATTCAATTAAACCAGTCGCAATC
TGTGTTAATTCAATATTAGATGTAAGACACTGGGGTGATGCATCACATTTAAGTGATATT
TTACTTAACAATTTGCTTCCAGGACCTGTTACTGTAGTTTTAGAAAAGACGAAATATTTA
GATAATCCATATTTAAATCCACAGACAACGAAAATTGGTATTCGTATACCCAATAATGTA
TTTATAAATAATATGACCAACGTATTTAATAAACCTGTGGCTTTAACAAGTGCAAATTTT
AGTAATGAACCATCAACGCTGTGCATAGAAGAGTTTAAACATCTCTATGAACATTTGGGG
GCAGTGTTTGATGGTGGTACCTTAAGTCGAGGCCTTAATGCTAACAGAATTGGTTCAACA
ATAGTTGACCTGTCTGTTAAAGGAGAATATAATATAATTAGAAAAGGTATTTCATATGAA
AGAATTGTTGAATTTTTAAATAGTTATGGTTTAAGAGGTGCCGTTAAATAA
Protein sequence:
MVEEAFESSLRYGCNTCPYIYNIRRKVSSRTFPKLKELDYIMGGAAAWENVDSTDAVCPK
CAYVRYKSVMSTMKIDKMASIFPCDDVSSYVKAAEYLEKGEVIAVPTDTIYGLACSAKCP
EAIKKLYTIKGRDSIKPVAICVNSILDVRHWGDASHLSDILLNNLLPGPVTVVLEKTKYL
DNPYLNPQTTKIGIRIPNNVFINNMTNVFNKPVALTSANFSNEPSTLCIEEFKHLYEHLG
AVFDGGTLSRGLNANRIGSTIVDLSVKGEYNIIRKGISYERIVEFLNSYGLRGAVK