| New model in OGS2.0 | DPOGS207095 |
|---|---|
| Genomic Position | scaffold1:+ 2550481-2573221 |
| See gene structure | |
| CDS Length | 2790 |
| Paired RNAseq reads | 1319 |
| Single RNAseq reads | 3867 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013059 (5e-92) |
| Best Drosophila hit | CdGAPr, isoform C (3e-24) |
| Best Human hit | rho GTPase-activating protein 15 (2e-50) |
| Best NR hit (blastp) | PREDICTED: similar to Rho GTPase activating protein 15 [Acyrthosiphon pisum] (4e-90) |
| Best NR hit (blastx) | PREDICTED: similar to Rho GTPase activating protein 15 [Acyrthosiphon pisum] (3e-84) |
| GeneOntology terms | GO:0005737 cytoplasm GO:0030675 Rac GTPase activator activity GO:0005622 intracellular GO:0016020 membrane GO:0005515 protein binding GO:0008360 regulation of cell shape GO:0005096 GTPase activator activity GO:0007165 signal transduction |
| InterPro families | IPR008936 Rho GTPase activation protein IPR001849 Pleckstrin homology domain IPR000198 Rho GTPase-activating protein domain IPR015767 Rho GTPase activating IPR011993 Pleckstrin homology-type |
| Orthology group | MCL19028 |
Nucleotide sequence:
ATGTGTGAGGTTACAAGTTGGATTCCGCACGCCGTTGTGGAAACACTGAGAGACCGCTCC
GCGCAGCCCGTACTAGCTTGGCTCACTACAATACGAGCTTCGATCGAAGAGTACGATCCC
CTAGTCGTTGTCCGACCACAATCTTCGGTTTCGGTGGAATCAGAATCTGACAGTGCCTTC
GACGAAATCCTCTCCCAACTAGGAAAGGAGATATACAAGCTAGATGAATACCAAAGAAAT
TTAGCGCCGAACTTAAAGAACGTTTCAGTTAGCATCATGAATATATTCGACGAGTGCTTG
GAAGGTATTAATCAAACGCAGAGTGTGGAGACCGAGACTAAGATGCTGGATATCCAGTCT
AAACCATTGACGGATGAAAATGCCACTCATGATTCTGAAGCGAGTGTTGAGGTGGGTTCC
GTGACGACGAGTACACCGGTGAATATTCAGCCACCAGCGGTGCCGCCTCGTAAAGTGAAG
ACGCGATCACCATCACCGTCACCGTCGTACGATAACATGGAGTTCAAGGACGTGGAGACG
TTATCAGACAGCGATTCGGAGAGCACGTGTTGGAGCTACCAGGAATGTAATGTTGACAAC
GACACGGAGACTACCAAGCCGTACGAGGCGCTCTGGTCGCATTCCAGCGGTTATCACAAC
TCGGACGAGATATTGCGTTGCGTTCTGTCACAGGCGCAGCAGAGGGCGACCATATCGCGA
TTGTCTTTCGATACCGCCAGCGACTTTTTGCCGCAGCCGTTCTCTGTTTACGCCTTACAA
GAGGTGGGAGGCAGGTGGCGCTCAGTCGCTGCCATGACGCCGGACAAGCCGTGCGACGAT
GGCTACGAGCCGGTCCGGGATGCTCTGACCGACGAGAATATATACGAGGAAATTGAATAT
GGTTATAGTTACACGGACGAGGGTTGCTCCTGTGGAGGCAGTGTTGAGGTTGAGAGTTGT
TCTATAAGTGCCAGTTCAGATGGTGTTGGTAGAGAGAGTCCTTTATACGCCAATTTGAGG
GATCACGACGCTTACGCCATCCCTCAAGATGTCATATCCTGGAAGAACATGCTGCTCGAT
CCGTACTACAACGAAGACGAGGAGGACGAGTGGATCACCCCGGAAGAGTGCGAAGTATAC
TCCCGGGAGAGGAGACCGCCGCTGGTTATACCCCGTATCACCCAATATCGCCCGCCTCGG
ACCTCCAGACCACAGATACAATACTCTGAGGAAACTCTTCAAGATGTTCCGGCCAAATCT
TGGAACTGGTCTCCGACGTCCGAACGGTCTCACCTCGACTTGGAGCGAAGCTACACCAAG
CCCACCTGCGATAATTCGATGCTATGGGCCAACAAAAGACTCGGAGGTTCGACGGAGAAC
CTGCTGGCTCCGCGTCGTCCCAACCAGCTGCAGCTGCCGGCGTCCTCCTCCGGTGACAGT
TTGGATGTGGAGGTCCGTGAGAGAGATCATCACAAGGAGAGGAATGCTCGTTCCCTCATG
ATGATGAAGCACAAATCGCGACCAGTCGCCTCCCCAAGGACTGTACTGCACGCGCCTATA
GAGGCGACAGTCCTCTTCGAGGGTCCAGTCAAACGGACGAAGTTCTTCGAAGGAGGAAAG
AAGGCCAAAAAGAATTGGACCGACTGCTACATGATCCTGACACCAACAGCGCTGGTCTTC
TACAAAGATCAAAGGACTTATATAGCATCTAAGTCGTCCGGTTCGCCTCCGAGCCCCGGC
GGCGCTCGCGCCGAGCTGGTACTGCCGCTGAGGAACGCTCACGTCCTCGCCTGCATACAG
ATGCACACCAGGAGGTACACTAGGTCGTTGGTGCTGACGGTGGAACACGACCAATACTTG
CTGCAGACAGAGCACGAGGAGGCAGCACGACGCCTGCTGGCCACCGTTCACAACGTTATA
TACAAACTGGGTCCCCCCACTCTAGAAGATCGTCCGAGTCCATACCAAAGCAGCAGCACG
GACCTGGAGAGCCTGGGCCGGACCCCGCCTGTAGCCAGGCATAATCGCAAACAGAAAGCC
GGTGGCAGTAGCAATGAAGATTTGAGTGATACGACGGAGGTTTCTATCCAGAAATCACAC
GTCAGGAGTAGGTTGAAGAAGTTCTTCGCGAAGAGGCCAGCGATGGAAGTGCTGGTGAAA
AAGGGGATTTACAAAGACGAGCCAGTGTTCGGTCGTCGTTTGGAGGAGGTCTGTCCTCTC
ACGCCTCCACGAGTGCCGGAGTTCGTGCGCGCCTGTGTGCGAGAGATAGAGGCCAGCGAT
GACAATATGGCCACCGACGGTCTGTACCGGGCCAGTGGAAACCTCAGCCAGGTCCAGAAG
ATACGTCTCGAGATTGATCAGAACAATATGTCGGTGATCGAGAACAGCCCCGACATCCAT
GTGTTGACGGGTTCCCTGAAGCTGTTCTTCCGCGAGCTCAAGGAACCGCTCATACCGTGC
TGTCTCTTTGACCGTGTGCTCGCTGCCTGCTCGATACGTCCGAGAGAGGCCAGGATCAGG
GAGTTCCGTGATATAGTGCAGTCGCTGCCGCAGTGCAACAGGGATACACTGAAATTCCTA
CTGGAACATCTATTGAAAGTAACCCAGTACAGCGAACGCAATCGCATGCACACAGCGAAT
TTGGCCATAGTATTCGGGCCCACACTGCTATGGGCTCCCGCAGAACAAGCCCATAACATA
GCCATAGACTGCATCCAACAGAACAACGTGGTGGATGTCCTGCTGACTGACTTCAGAGAG
ATCTTCGACGGCACCAGGAAGAAGACGTGA
Protein sequence:
MCEVTSWIPHAVVETLRDRSAQPVLAWLTTIRASIEEYDPLVVVRPQSSVSVESESDSAF
DEILSQLGKEIYKLDEYQRNLAPNLKNVSVSIMNIFDECLEGINQTQSVETETKMLDIQS
KPLTDENATHDSEASVEVGSVTTSTPVNIQPPAVPPRKVKTRSPSPSPSYDNMEFKDVET
LSDSDSESTCWSYQECNVDNDTETTKPYEALWSHSSGYHNSDEILRCVLSQAQQRATISR
LSFDTASDFLPQPFSVYALQEVGGRWRSVAAMTPDKPCDDGYEPVRDALTDENIYEEIEY
GYSYTDEGCSCGGSVEVESCSISASSDGVGRESPLYANLRDHDAYAIPQDVISWKNMLLD
PYYNEDEEDEWITPEECEVYSRERRPPLVIPRITQYRPPRTSRPQIQYSEETLQDVPAKS
WNWSPTSERSHLDLERSYTKPTCDNSMLWANKRLGGSTENLLAPRRPNQLQLPASSSGDS
LDVEVRERDHHKERNARSLMMMKHKSRPVASPRTVLHAPIEATVLFEGPVKRTKFFEGGK
KAKKNWTDCYMILTPTALVFYKDQRTYIASKSSGSPPSPGGARAELVLPLRNAHVLACIQ
MHTRRYTRSLVLTVEHDQYLLQTEHEEAARRLLATVHNVIYKLGPPTLEDRPSPYQSSST
DLESLGRTPPVARHNRKQKAGGSSNEDLSDTTEVSIQKSHVRSRLKKFFAKRPAMEVLVK
KGIYKDEPVFGRRLEEVCPLTPPRVPEFVRACVREIEASDDNMATDGLYRASGNLSQVQK
IRLEIDQNNMSVIENSPDIHVLTGSLKLFFRELKEPLIPCCLFDRVLAACSIRPREARIR
EFRDIVQSLPQCNRDTLKFLLEHLLKVTQYSERNRMHTANLAIVFGPTLLWAPAEQAHNI
AIDCIQQNNVVDVLLTDFREIFDGTRKKT