| New model in OGS2.0 | DPOGS207108 |
|---|---|
| Genomic Position | scaffold1:+ 2777220-2781815 |
| See gene structure | |
| CDS Length | 1590 |
| Paired RNAseq reads | 267 |
| Single RNAseq reads | 630 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012785 (6e-134) |
| Best Drosophila hit | ND |
| Best Human hit | selenoprotein O (7e-81) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Saccoglossus kowalevskii] (9e-128) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Saccoglossus kowalevskii] (2e-125) |
| GeneOntology terms | GO:0003674 molecular_function GO:0008150 biological_process GO:0009507 chloroplast |
| InterPro families | IPR003846 Uncharacterised protein family UPF0061 |
| Orthology group | ND |
Nucleotide sequence:
ATGGCCAAACCAATAAGTGATTTCAAGGAATGGAAGTTTCGACTCCCACCGAGCTATGTT
CAGTTGCCTATAACCGGATACCCTGATTACAATATTCCCAGAGCCGTCAAAGATGCTGTT
TTTGTTAAAGTACCAACGGAGCCCCTTACTGGAAAAATTGATCTTGTCTGTGTGTCCAAT
GATGCATTGACTGACATTCTCGATCTTGATCCTGTAGTAGCGGAGAGTGAGGAATTTGTC
GAATTCATAAATGGCAAATATTTACCTCAAGGTGCTCTGAGTGTATGTCATGGATATGGT
GGGTATCAATTTGGTTTTTGGGCTGACCAGCTTGGAGATGGTAGGGCACATATTCTTGGT
GAATATGTTAATAGTAAAGGAGAGTTATGGCAGTTGCAGTTAAAGGGTTCCGGTGAGACT
CCCTTTTCTCGTTTCGGTGACGGTCGTGCAGTACTCAGATCATCGCTGCGTGAGATGGTA
GCTAGCGAGGCATGCCACCACCTTGGCATTCCTACCACCAGGGCCGCAGGATTGGTGGCA
AGTGATTCCCACAAGGTCCTGCGAGATAGGAGTTACAGTGGTCTGGCCCGTCCCGAGCGG
GCGGCTGTGCTACTCCGACTGGCACCTAGTTGGATGAGGATTGGAAGTTTCGAGTTAATG
CACCGCAGGCAACAGACAGACATGTTGGTCGAGCTTGCTGATCATGTTATAAAGCATTTC
TTCAGCCACATTGATCTTAATGATAAAGACAAATATGTGAAGTTTTTCACAGAGGTGGCT
CACAAGAACCTGGACATGGTTGCCACCTGGCAAGGGCTTGGCTTCACTCATGGGGTTCTT
AACACAGACAACATCAGTATATTGGGTCTGACCATTGACTATGGACCGTTTGGGTTCATA
GAACACTATTATGAGAATTATGTTCCAAACTCGTCCGACGATATGGGAAGATATGCATTT
AACAAACAGCCAGAGATCTTGCTGTGGAACTTGGGAAAATTGGCTGAAGCGTTACAGTTA
ATACTTTGTGATGAGAGTAAAAAGAAAATTAAAGATGTTATCGATACTTTGGAACTGTAT
GTGAAAGATAAAATACTTCATACTTACATTCTAAAACTTGGTCTCACTGAAGTCAGAAAA
GGTGACGATAAATTGGTGAAAGATTTCCTTGAGATGATGCAACAAACGTCATCCGACTTC
ACTGGCAGTTTTAGACAAATTTCCGAGATTAGTTTGAATCAGCTACTAGATAAGGAAACG
TTGGAGTCCAAGTGGGCTTTAGCAAGGCTGAGTAAATCGAAGAATTGGGATAAGTGGATT
CAGCGATACAAGGATAGATGTTGTCAAGAAAATGTGAATGAAGACGAGAGAGTGAAACAT
ATGCTCAAAGTAAATCCACTATACGTCCCCCGTAATTGGATGTTACAAGAGGCCATTAAA
GATGCAGAGAACAATGATTTCAACAAGGTAAGATTGTTACTTGAAATCTTTACCAAACCG
TATGAAGCGAATGAAGAAGCTGAAAAATTGGGATACTCGTCACAACCACCGAGCTGGTCC
TTTGGCCTTAAGTTGAGTTGTTCCAGTTAA
Protein sequence:
MAKPISDFKEWKFRLPPSYVQLPITGYPDYNIPRAVKDAVFVKVPTEPLTGKIDLVCVSN
DALTDILDLDPVVAESEEFVEFINGKYLPQGALSVCHGYGGYQFGFWADQLGDGRAHILG
EYVNSKGELWQLQLKGSGETPFSRFGDGRAVLRSSLREMVASEACHHLGIPTTRAAGLVA
SDSHKVLRDRSYSGLARPERAAVLLRLAPSWMRIGSFELMHRRQQTDMLVELADHVIKHF
FSHIDLNDKDKYVKFFTEVAHKNLDMVATWQGLGFTHGVLNTDNISILGLTIDYGPFGFI
EHYYENYVPNSSDDMGRYAFNKQPEILLWNLGKLAEALQLILCDESKKKIKDVIDTLELY
VKDKILHTYILKLGLTEVRKGDDKLVKDFLEMMQQTSSDFTGSFRQISEISLNQLLDKET
LESKWALARLSKSKNWDKWIQRYKDRCCQENVNEDERVKHMLKVNPLYVPRNWMLQEAIK
DAENNDFNKVRLLLEIFTKPYEANEEAEKLGYSSQPPSWSFGLKLSCSS