| New model in OGS2.0 | DPOGS207120 |
|---|---|
| Genomic Position | scaffold1:+ 3001018-3012328 |
| See gene structure | |
| CDS Length | 1539 |
| Paired RNAseq reads | 2058 |
| Single RNAseq reads | 5723 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA012489 (7e-123) |
| Best Drosophila hit | coro, isoform B (0.0) |
| Best Human hit | coronin-1C isoform 1 (1e-151) |
| Best NR hit (blastp) | GH19864 [Drosophila grimshawi] (0.0) |
| Best NR hit (blastx) | GH19864 [Drosophila grimshawi] (0.0) |
| GeneOntology terms | GO:0003779 actin binding GO:0015629 actin cytoskeleton |
| InterPro families | IPR001680 WD40 repeat IPR015505 Coronin IPR015943 WD40/YVTN repeat-like-containing domain IPR015049 Domain of unknown function DUF1900 IPR015048 Domain of unknown function DUF1899 IPR019781 WD40 repeat, subgroup IPR019775 WD40 repeat, conserved site IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain |
| Orthology group | MCL10603 |
Nucleotide sequence:
ATGTCGTTCAGAGTGGTTCGTAGTTCAAAATTCCGCCATGTATATGGTCAGGCCCTTAAA
AGGGAACAGTGTTATGATAACATCAGAGTATCGAAAAGTTCGTGGGACTCTACGTTTTGT
GCTGTAAACCCCACTTTCCTGGCCATCATTGTAGAGTCAGCCGGCGGCGGAGCCTTCATA
GTTTTACCGCATAATAAGGTCGGCCGCATACCAGCAGATCATCCTCTAGTGGGAGGACAC
AAGGGTCCAGTGTTGGACATAGCGTGGTGCCCCCACAACGACAACGTCATCGCCAGCGGC
TCCGAGGACTGCGTTGTTAAGGTATGGCAAATACCGGACGGTGGACTGACCCGTACGTTG
ACGGAGCCTGTGGTGGATCTCGTGTATCATCAGCGACGCGTGGGCTTGGTGCTATGGCAT
CCAACCGCTCAGAACGTGTTGCTCACTGCTGGCTCCGATAACCAGATAGCGATCTGGAAT
GTTGGCACTGGCGAGGTCTTGCTGAGTCTGGACTGTCACCCTGACCTCATCTACTCCGCT
TGCTGGAACTGGACGGGCTCCAAGCTGCTCACCACCTGCCGTGACAAGAAGATTAGGATA
ATAGATCCTCGCAAGGGAGAAGTGGAATCAGAGGCCATAGCTCACGAAGGCAGCAAAGCG
TCCAGAGCAATCTTTTTAAAGCATGGACTGGTGTTTACCACTGGATTCAGTCGCATGTCC
GAGCGTCAGTACACTCTCCGTACACCGGACGCCCTCGGAGAACCTATCGTGACGGTGGAG
ATTGACACAAGTAACGGAGTCATGTTCCCACTCTACGATCCCGACACCAATCTCATCTAC
CTCTGCGGGAAGGGCGATTCGGTCATCAGATATTTTGAGGTCACCCCAGAGCCGCCTTTC
GTCCACTACATTAACACCTTCCAAACACCGGACCCACAGAGAGGTATTGGTATGATGCCC
AAGCGCGGCTGTGACGTAGCTACGTGCGAAATAGCGAAGTTTTACAGACTTAACAACTCT
GGTCTCTGTCAGGTGGTTTCGATGACCGTGCCGCGTAAGTCTGAGTTGTTCCAAGAGGAC
TTGTACCCTGACACATTGTCCGATGAAGCTTCATTGACGGCCGACGAGTGGCTCGCGGGT
GAAGACGCCGAACCCTGCACCATGTCGCTGAAGGGTGGTTACGTAGCGGGAAGGGCGCAC
AACCTCACCGTGACCAAGAGGAACGCGCTGGCGACCGCCAGGGATAAGGAAAAGGAGAAG
GAGAAGGAAAAGGATAAGGAGCCCGAGAGGAGCCCCACCCCGGGCCAGAGGGACACACCC
GCCACGCCGGCCGCCACCCCACCGCCAGCCTTCACCGCTATGGTGGAGAAACAACTATCG
GACCTGGTGGAAGAGATCCGTAAGCTGAAATCGGTTATAGTGAAGCAAGAGAACCGTATA
CGGGCACTAGAGGCTACGGTTAAGGGACAAGTGGCTGCAGCCACACCAGTACCCGCTGAT
CACAACCACGACGACAACATGGCGCCCGACGAGGTCTGA
Protein sequence:
MSFRVVRSSKFRHVYGQALKREQCYDNIRVSKSSWDSTFCAVNPTFLAIIVESAGGGAFI
VLPHNKVGRIPADHPLVGGHKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLTRTL
TEPVVDLVYHQRRVGLVLWHPTAQNVLLTAGSDNQIAIWNVGTGEVLLSLDCHPDLIYSA
CWNWTGSKLLTTCRDKKIRIIDPRKGEVESEAIAHEGSKASRAIFLKHGLVFTTGFSRMS
ERQYTLRTPDALGEPIVTVEIDTSNGVMFPLYDPDTNLIYLCGKGDSVIRYFEVTPEPPF
VHYINTFQTPDPQRGIGMMPKRGCDVATCEIAKFYRLNNSGLCQVVSMTVPRKSELFQED
LYPDTLSDEASLTADEWLAGEDAEPCTMSLKGGYVAGRAHNLTVTKRNALATARDKEKEK
EKEKDKEPERSPTPGQRDTPATPAATPPPAFTAMVEKQLSDLVEEIRKLKSVIVKQENRI
RALEATVKGQVAAATPVPADHNHDDNMAPDEV