| New model in OGS2.0 | DPOGS207141 |
|---|---|
| Genomic Position | scaffold1:+ 3476879-3477870 |
| See gene structure | |
| CDS Length | 558 |
| Paired RNAseq reads | 17122 |
| Single RNAseq reads | 87612 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013108 (2e-53) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | RecName: Full=Apolipophorin-3; AltName: Full=Apolipophorin-III; Short=ApoLp-III; Flags: Precursor (3e-65) |
| Best NR hit (blastx) | RecName: Full=Apolipophorin-3; AltName: Full=Apolipophorin-III; Short=ApoLp-III; Flags: Precursor (9e-65) |
| GeneOntology terms | GO:0005615 extracellular space GO:0045087 innate immune response GO:0050830 defense response to Gram-positive bacterium |
| InterPro families | IPR013326 Apolipoprotein/apolipophorin IPR010009 Apolipophorin-III |
| Orthology group | MCL29913 |
Nucleotide sequence:
ATGGCCAAATTCATCGTAGTAATCTTCGCTTGCTTGGCTTTAGCCTCAGCTGGACTGGTG
CGTCGCGATGCTCCCAACATGTTTGATGAGTGGCAAAAGCACGCCCAAGAGTTCCAGAAG
ATTTTCAACGATCAATTGAACGCTCTCACCAGCTCCAAGAACACCGAGGAGTTCAACAAA
GTGTTGAAGGAGGGTTCAGAGTCTGTACTCTCTCAGATTTCTGCTTTGTCAGGCAGCCTT
CAATCTGCTCTGAAGGAAGCCAATGGCAAGGCCAAGGAAGCTCTTGAGCAGGCCCAGGCT
AACCTGCAACGTACCGCCGAGGATCTGCGCAAATCTCACCCAGAGGTAGAACAGCAAGCC
AACGCTCTTAAAGCAAAACTGCAGGACGCCGTTTCCAAGACCGTTTCTGAGACCCAGAAG
TTGGTGAAAGAAGTGTCAGCGAACATCGAACAAACCAACCAGAAGCTGACCCCTAAGATC
AAGGAGGCCTACGACGACTTCGTGAAACAAGCTGAAGATGTACAGAAGAAGCTGCACGAA
GCCGCCAACAAGCAGTAA
Protein sequence:
MAKFIVVIFACLALASAGLVRRDAPNMFDEWQKHAQEFQKIFNDQLNALTSSKNTEEFNK
VLKEGSESVLSQISALSGSLQSALKEANGKAKEALEQAQANLQRTAEDLRKSHPEVEQQA
NALKAKLQDAVSKTVSETQKLVKEVSANIEQTNQKLTPKIKEAYDDFVKQAEDVQKKLHE
AANKQ