Genomic Position | scaffold1535:+ 23412-24845 |
---|---|
See gene structure | |
CDS Length | 1434 |
Paired RNAseq reads   | 3 |
Single RNAseq reads   | 20 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA012141 (8e-48) |
Best Drosophila hit   | ND |
Best Human hit | general transcription factor II-I repeat domain-containing protein 2A (1e-74) |
Best NR hit (blastp)   | hypothetical protein TcasGA2_TC012929 [Tribolium castaneum] (1e-122) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC012929 [Tribolium castaneum] (2e-119) |
GeneOntology terms    | GO:0005634 nucleus GO:0003677 DNA binding GO:0005622 intracellular GO:0008270 zinc ion binding GO:0045449 regulation of transcription |
InterPro families   | IPR012337 Ribonuclease H-like |
Orthology group | MCL16751 |
Nucleotide sequence:
ATGGCTTCAAAAAAAAGGAAGTTAGCAGAAGAAAATAGGGTATTTAACGATGCATGGACA
GATTTATACTTTTTTATTAATTGCAATGGCAAACCGCTATGCTTAATATGCCAAAAAACC
CTTACTATTCAAAAAGAATATAATGTCAAACGCCATTATGATAGCGAGCATAAAGCTAAA
TTTGCATGCCTAGTAGGTGAATCTCGAAAAAATAAAATTAACGCACTGAAATCTTCAGTT
AAGAACCAACAAAATGTTTTTAAGGTTCAAGTACAAAGTAACGAGTCGAGCATACGTGCA
AGTTTAAGGGTAGCGGAAATTCTTGCGAAGTCTGGCCGACCATTTACCGACAGCGAACTT
ATAAAACAATGTGCTTTAGTCATGGCTGAGGAGGTGTGCCCCGACCTAAAAAAAAAATTT
GAAAATATAAGTCTTTCTGCAAGAACATGTACTCGCCGAACTGAAGATTTGGGCGATAAT
TTATGCCAGCAACTCCGGGAAAAAGCACAACAATTTGAATGGTTCTCTTTAGCTACCGAT
GAAAGTAATGATGTTACTGACACTGCCCAGTTTTTAATATTTGTTCGCGGAATCGATAAG
AATTTTAATGTCTATGAGGAGCTTTTACAGTTATGTAGTTTGAAGGGCACGACTACCGGA
GAAGATTTGTTTTGTAACTTAGAACAAGCGCTAATATCAATGCAATTACCATGGGAAAAA
TTGGTAAGTGTTACAACTGACGGAGGCAGAAACATGAGTGGACAAAATAAAGGTTTGGTA
GGTAGAATTAAATCAAAACTGGCAGAGATAGGATGTGCCATCCCATTATTTTTCCATTGC
ATCATCCACCAAGAAGCGTTATGTTCCAAGGTCGTATCATGGAAAGAAGTAATGGACATC
GTGGTATCGACTGTAAACTACATCAGAAAAAATGGATTGACTCATCGTCAATTTCAACAG
TTTCTGTCAGATACGGAAGCAGATCATCGAGATGTTGTTTATTATTCTGAAGTACGATGG
TTAAGTAGAGGCGCAGTGCTGAAAAGATTTTTTGATCTCAGAAAAGAAATCAATACTTTT
ATGAATGAAAAAGGCAAATCTATTCCAGAGCTGACAGATACTCAATGGTTGATAGACGTT
GGATTTTTGACAGATGTCACTCATGAATTAAATACGCTAAATTTGAGGCTTCAAGGTAAA
AAAAAAATAATTTCTGATATGCACACAGACGTAAAAGCATTTCAAATGAAAATTAAACTC
TTTATAAAGCATATTGATGAAAAAAAGTTGGATCATTTTCCGAATTGTAAAGAGGCTGTT
GAGGAAGCTAGAATTAATTTTCATTGGAACAGTGATAACATGAAGGACATTTTAATTGAA
CTGCAAACTCAATTCCAGCAATCTGAAGGTGTTTGCGAATCCTTTTTCATGTGA
Protein sequence:
MASKKRKLAEENRVFNDAWTDLYFFINCNGKPLCLICQKTLTIQKEYNVKRHYDSEHKAK
FACLVGESRKNKINALKSSVKNQQNVFKVQVQSNESSIRASLRVAEILAKSGRPFTDSEL
IKQCALVMAEEVCPDLKKKFENISLSARTCTRRTEDLGDNLCQQLREKAQQFEWFSLATD
ESNDVTDTAQFLIFVRGIDKNFNVYEELLQLCSLKGTTTGEDLFCNLEQALISMQLPWEK
LVSVTTDGGRNMSGQNKGLVGRIKSKLAEIGCAIPLFFHCIIHQEALCSKVVSWKEVMDI
VVSTVNYIRKNGLTHRQFQQFLSDTEADHRDVVYYSEVRWLSRGAVLKRFFDLRKEINTF
MNEKGKSIPELTDTQWLIDVGFLTDVTHELNTLNLRLQGKKKIISDMHTDVKAFQMKIKL
FIKHIDEKKLDHFPNCKEAVEEARINFHWNSDNMKDILIELQTQFQQSEGVCESFFM