| New model in OGS2.0 | DPOGS205968 |
|---|---|
| Genomic Position | scaffold407:- 58878-70169 |
| See gene structure | |
| CDS Length | 4014 |
| Paired RNAseq reads | 2802 |
| Single RNAseq reads | 6725 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009396 (0.0) |
| Best Drosophila hit | CG14805 (3e-60) |
| Best Human hit | WD repeat-containing protein 18 (2e-54) |
| Best NR hit (blastp) | PREDICTED: similar to ANK repeat and LEM domain-containing protein KIAA0692 [Tribolium castaneum] (8e-116) |
| Best NR hit (blastx) | PAF acetylhydrolase 45 kDa subunit, putative [Aedes aegypti] (4e-88) |
| GeneOntology terms | GO:0005635 nuclear envelope |
| InterPro families | IPR011046 WD40 repeat-like-containing domain IPR020683 Ankyrin repeat-containing domain IPR001680 WD40 repeat IPR002110 Ankyrin repeat IPR015943 WD40/YVTN repeat-like-containing domain IPR019781 WD40 repeat, subgroup IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain |
| Orthology group | MCL12240 |
Nucleotide sequence:
ATGTCTAATTTACTAGAAGTATTAGTAACCTGTGACTCAAACAATACATTATGGACATCT
AGTATTTGGGATCCTAACACAGGGACGAATTTAATGGCTTACAAAGGGGGTGGAACAAGT
GAGAAAGGAACTCTCAATTTTATTGGCAAAGATTACATCGCTTCTGTTGAAAAAACCAAA
CCAATACTTCATGTATGGCCTTTAAATTCACACCAAACAGTACAAGGCATGCGGTTTATT
CTTCCCGGAAAAGCTAGTGCATTGGCCATTTCCCACGATGGTACTTATTGTGTTGCTGGT
ATTGAAGACAAAATTTACCTTTGGCAAATAGCCTCTGGGAGTCTCTTGACTATTATTAAC
CGTCACTATCAGAAAGTGAACCTATTAAAATTTACAAGTGACAGTAGATTCTTTGTATCG
GCCGCTGAGGATGGTATGGTGATGGTGTGGTCATTGGCAACTGTAGCAGCCAATGCTGAA
GTGGAACTCGTCACTCAGGCTATAGCTGGTCAACATGATCCAGTATATATATTCTCTGAT
CATTCCCTACCCGTTATAGACATGTGTATAAGCAAGTTGGGATTACATGGTAGATTATTC
ACAGTTTCAAGTGATAGGACTTGTAAAATCTATGACCTAACATCTGGTGAGATGTTATTG
AATCTTGTCTTCGATGAACCTTTGTCATCAATCACATTGGATGTTTTAGAACTTAACATA
TTTGTTGGATCGACTGAAGGGAAGATCTTTGAAATCGGTTTACAAAAACAACACACCAAT
AGAGATGTTTTGGTGAACGGAAATGATACTAGTCAAATATTCTCCGGTCATAGTAAAGCC
GTTACATGCTTATCTGTTTCTTTGAATGGTGAAATTTTAATGTCTGGCGGTAATGATGAA
CAAGTCATACTGTGGCATATAAGAAGCAAACAGCCAGTAAGGACAATAAAACATAAAGGA
CCAATAACAAATGCATTCTTCACACAAAACTTTGCAGCTATTTATGATCAAGATTTTTCT
CCGAGTGTAGTCCTGCATAGTCTAGAAAGAAGTTTGGAGAATAACAGTGACGAAATCAAT
GAGGTGGAAGTGCTCATAAGTGAAAAAACAAACTTCTGGCCGGAGTACATTGAAAGTAAT
ATAGACGTCGACCCCAAGGATTTGGAACTGGAAGTACGACAAAATGAAGAATTTTTAAAG
AAGGAATTGGAGAAAATTAAGCTAATTAATGCCAACTTGTATAATCTTTTTCGGGTATCC
AATGCCGCAGTAATAATAGTTTTTTTTCTAATTCGCCTGATATGTTTTTATGACGATATA
TTAAGGAGTCCAGGCGAAATGTCGAAGGCCGCGCTCATTCCAGAATGTAAAAAGGATATA
GGAGGTGTGAAAGAAGATATATGTGTACCAGCTAATGAGAAAAAAGAGGGAGCAATCAGT
TTATATAGAAGACTTCTGCGTTTGGATACATTTAGCAAGAGGAATACATTAGACAGCCCA
ACAGAAATAGAACCACAAGCGACTTACTATGGTGTTTATATACCATGTGAAATTAAAAAA
GGACCTGATGAAGAAACAATACATGTGTACACTGACAAGTTGGAAGCATTAGAGCTGTTC
CGACGGTACAAATCAGCCAGGTTCAAAGCCTTCAGGAACCGACAGGATGCTATGTCATTT
GCTCTTAGAGGAGCCGAGCCAATAGACAACCATGAGGGCAACGGGAATTCCATAATGGGA
GAGAAGCCTTATCCTTTTAAAGCACCGTCGCCACAAGATATGGTGACATTAAGGAAGGCC
ATAGAGGCTGGTAAGGTCACGGTGGTCAGAGATAGGATATGGGATAATCCAAGATATCTC
GTCAGCAGTGGAAGTACTCCAGCTATAGTACAGGAGGGTTCCCGCTACAATGCACTCCAT
ATAGCTGCGAAGGCACTGAATGCTGAGATATGTAATCTAATATTAACGACAGTTGGCAAC
CCTGCCTTTGTTCAGACTTTGTACGGAATGGAAACAGACTATGAGTCTTGTAAGGAATTC
GCAACAATCCTTCTAGACAGATATCTAAACACTCCAGACAAGGCTATGAATGAGACCCCT
TTACACTTTGCTGCCAAGTTCGGTGGTGACGAGGTCGTGGACGTGTTGACTTCATTTCCA
CAATGTAATAAAATGGCGAAAAATAAATACGGGGAAATGGCGAAAGATGATTTGAACCCG
GATCCCCTCTCTCCGAGATACGAAATCTTCGCGTTCGCTGGACCCATGGACTCGCAATCC
GCTGAAGGGTTCAGGAGGAGGTGGAAAACTCCGCCCAGGGGAGGATTTAGACTCAAAGAC
ATCAGCAAGGGACTGGAAGCAGTTGGCAGGAACCTAGCTGAGGAGATGCAAATAGGATGG
AAGGAGTACTGGGCGTTCCTCGACACGTTCACTGACCTGAGGTCAAAAGAGGGTCTGGAT
CTGTTAGAGAGTTACTTGAAGACAAAATACGAAACCGCGTTCTCGTTGGCATACAACGAC
AGCGTCAACACTAACCACGAACTGTCCATGTCGAGGATAAGCCTAGGAAACCTATCACAC
AACAGTCAACTGGACACAGCGCTCAGCCCTATCTCAGAACTGTGTGTGGCCATGAAAACC
TGCAGGATCACCGACGAAGCCTCCAATTGGCGGAGATGCGACAGAACGAGGCGCGTGGCC
CCACCCAGGACACACCCCAACGGGGATTCCCCTCAACCGATAAATCAAAGGGTCAGCCAG
CTGCTGTGCATCGAACGCACGTGTCAGGTCTTCGCCAAGAGGATAGCGGACGCCCTCGTA
TTCTCTATAACAGCGGAACCGGAAGTCGCCGGTGAATCATTGAAATCGGAAGCCAAACAT
TTGCAGCACACGATACACACGTACATGGGCGACGAGAGGTTCAAAGAGATCAACTTCGCG
TTGATACATTCAAGGCTGGCGCAGCTCGTCGTTTTCAACTTGACGCAGAAGACCAAGGAT
GCCGACGACATGAACTATCTGATAGACGTGCTCGGCGATCTGCGCTGTCTCGACGAAGAC
GTGTGCAGCTCGGACAGCGAAAGGAAACCCATCGCGTACAGAAATAATAGAGGCAAAGAC
AAGCACGCCACAGACGGACACGTGAGGTGTGTCTCCGGCTTTATATGCGACGAGCTGGCG
GACACGGCCAGGAGTAAACCACCGGCGGGGTCGGATGTAGAGTGTGTAGAGATATGGAAG
ATGGCGGCCGGTTGTAGCTGTAGTTGGCAGATTGATGTGTTCGAGCGCAGCGGGAAGAGG
AACTCCTTCAGGAAGAACAGGTCGAATCTCTCCACCAGCCCCAAAAACGACAGCTTCATA
CGGCGGCTGACATACGACTACGATATAGGTGACGGCAAACTTCAGAACAGTGAAGTACAG
AAACCATTAAGCGTGAACTCTCCCGCCGGAGATAACCTTTACACTTTGGACGTAGCCAAG
TGTCAAGTTGTAGAGGCTGAGATATCGGACGATGAATCGGTGGCGTCCTGCCAATCGGAT
TCGGACGCGTATGAGACAGCTGAAAATGACTCGGACGACGACATGCAAGACGCCAGCGAT
AGAGCTGTCACTGAACCATTTATATACGGCGAGGAACCTTCGAAGATGGACAGGCTCGTG
TATGACGCGATCTCGTCCTGCGAGATAACGGCCGACGAATACCCCAGCGTGTACCGATGG
AGACATTGTGTGGCGCTGTACCCAAAAACAGAGAGGGAAAGTTGGCGAGCCACCACGAAC
CTAGACGAATCAGTGTCATCTATGTCTTGGACTGTGGGGGAGTCGCCGCGGACCAGCAGA
CCGCGGTGTAGTACACCGCACAAGGATAGAGATATAAGAGATACGAGAGACTCACACGCC
GATAAGACTCTGCCGTTACAGGTTTCGAACTGGCTGCGAGTGACGGGTCCAAATTCGCCG
CGCTCGGCCCTCGTGTCTAAAAACGTCAACCAAAACGTCAGCTTCGGATTCTGA
Protein sequence:
MSNLLEVLVTCDSNNTLWTSSIWDPNTGTNLMAYKGGGTSEKGTLNFIGKDYIASVEKTK
PILHVWPLNSHQTVQGMRFILPGKASALAISHDGTYCVAGIEDKIYLWQIASGSLLTIIN
RHYQKVNLLKFTSDSRFFVSAAEDGMVMVWSLATVAANAEVELVTQAIAGQHDPVYIFSD
HSLPVIDMCISKLGLHGRLFTVSSDRTCKIYDLTSGEMLLNLVFDEPLSSITLDVLELNI
FVGSTEGKIFEIGLQKQHTNRDVLVNGNDTSQIFSGHSKAVTCLSVSLNGEILMSGGNDE
QVILWHIRSKQPVRTIKHKGPITNAFFTQNFAAIYDQDFSPSVVLHSLERSLENNSDEIN
EVEVLISEKTNFWPEYIESNIDVDPKDLELEVRQNEEFLKKELEKIKLINANLYNLFRVS
NAAVIIVFFLIRLICFYDDILRSPGEMSKAALIPECKKDIGGVKEDICVPANEKKEGAIS
LYRRLLRLDTFSKRNTLDSPTEIEPQATYYGVYIPCEIKKGPDEETIHVYTDKLEALELF
RRYKSARFKAFRNRQDAMSFALRGAEPIDNHEGNGNSIMGEKPYPFKAPSPQDMVTLRKA
IEAGKVTVVRDRIWDNPRYLVSSGSTPAIVQEGSRYNALHIAAKALNAEICNLILTTVGN
PAFVQTLYGMETDYESCKEFATILLDRYLNTPDKAMNETPLHFAAKFGGDEVVDVLTSFP
QCNKMAKNKYGEMAKDDLNPDPLSPRYEIFAFAGPMDSQSAEGFRRRWKTPPRGGFRLKD
ISKGLEAVGRNLAEEMQIGWKEYWAFLDTFTDLRSKEGLDLLESYLKTKYETAFSLAYND
SVNTNHELSMSRISLGNLSHNSQLDTALSPISELCVAMKTCRITDEASNWRRCDRTRRVA
PPRTHPNGDSPQPINQRVSQLLCIERTCQVFAKRIADALVFSITAEPEVAGESLKSEAKH
LQHTIHTYMGDERFKEINFALIHSRLAQLVVFNLTQKTKDADDMNYLIDVLGDLRCLDED
VCSSDSERKPIAYRNNRGKDKHATDGHVRCVSGFICDELADTARSKPPAGSDVECVEIWK
MAAGCSCSWQIDVFERSGKRNSFRKNRSNLSTSPKNDSFIRRLTYDYDIGDGKLQNSEVQ
KPLSVNSPAGDNLYTLDVAKCQVVEAEISDDESVASCQSDSDAYETAENDSDDDMQDASD
RAVTEPFIYGEEPSKMDRLVYDAISSCEITADEYPSVYRWRHCVALYPKTERESWRATTN
LDESVSSMSWTVGESPRTSRPRCSTPHKDRDIRDTRDSHADKTLPLQVSNWLRVTGPNSP
RSALVSKNVNQNVSFGF