| New model in OGS2.0 | DPOGS205969 |
|---|---|
| Genomic Position | scaffold407:- 47861-49553 |
| See gene structure | |
| CDS Length | 753 |
| Paired RNAseq reads | 196 |
| Single RNAseq reads | 707 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009397 (1e-125) |
| Best Drosophila hit | larsen (2e-90) |
| Best Human hit | vacuolar-sorting protein SNF8 (1e-73) |
| Best NR hit (blastp) | ELL complex EAP30 subunit [Bombyx mori] (5e-130) |
| Best NR hit (blastx) | ELL complex EAP30 subunit [Bombyx mori] (1e-125) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0045450 bicoid mRNA localization GO:0010797 regulation of multivesicular body size involved in endosome transport |
| InterPro families | IPR007286 EAP30 IPR016689 ESCRT-2 complex, Snf8 |
| Orthology group | MCL13777 |
Nucleotide sequence:
ATGAGACGGCGGGCAGGAGTTGGTGCTATTCAAAAACAGAGACTTGAGCAGGAGAAGTAT
AGAGAAAAAGGTTCCGAAATCCAGGAGAACCAATTCCAGCAGATGTCTAAGCAATTAGAT
GTATTCAGAGAAAACTTGGAAGAATTCGCCTCTAAACACAAAAACGAAATAAAAAAGAAC
GCTCAGTTCAGGCGTCAATTTCAGGAAATGTGTGCTGCAATCGGTGTTGACCCATTGGCT
TCTGGGAAAGGATTCTGGTCAGTTTTAGGCATTGGTGATTTTTACTATGAGCTTGGTGTA
CAAATAGTTGAGGTATGTCTCGCTACGAATTACAAAAATGGTGGTCTTATAACATTGGAT
GAATTAAGAAGTAGATTGATAGCCGCTAGAGGCAGAGCGAAGAAACATCAGGATATTACT
AATGAAGATCTTCTTGCAGCTGTTAAAAAACTTAAGATTTTTGGCAATGGTTTCACAGTT
GTATCGATAGGTAAAGGGAAATGGTTGGTACAGTCAATACCGGGTGAACTGAATTTGGAT
CAAACATTGGTGCTTCAAAAGGCTAGTGGTCTCGGTAAAGCTTGGATTTCCAAATCTGTA
CTCATCAATGATCTGGGTTGGAATGAAACGAGAGCTCAGAATGCTTTGAATCATATGGTT
AAGGAAGGTCTGGCTTGGGTGGACAGCCAGGACGACAATGAAATTTTGTATTGGTTTCCG
AGTATGTTCAATGAGTGTGTTACGGCATCCTAA
Protein sequence:
MRRRAGVGAIQKQRLEQEKYREKGSEIQENQFQQMSKQLDVFRENLEEFASKHKNEIKKN
AQFRRQFQEMCAAIGVDPLASGKGFWSVLGIGDFYYELGVQIVEVCLATNYKNGGLITLD
ELRSRLIAARGRAKKHQDITNEDLLAAVKKLKIFGNGFTVVSIGKGKWLVQSIPGELNLD
QTLVLQKASGLGKAWISKSVLINDLGWNETRAQNALNHMVKEGLAWVDSQDDNEILYWFP
SMFNECVTAS