| New model in OGS2.0 | DPOGS205970 |
|---|---|
| Genomic Position | scaffold407:- 39023-42145 |
| See gene structure | |
| CDS Length | 729 |
| Paired RNAseq reads | 88 |
| Single RNAseq reads | 207 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009398 (1e-101) |
| Best Drosophila hit | histone deacetylase X (1e-70) |
| Best Human hit | histone deacetylase 11 isoform 1 (3e-77) |
| Best NR hit (blastp) | PREDICTED: histone deacetylase 11-like [Saccoglossus kowalevskii] (2e-83) |
| Best NR hit (blastx) | PREDICTED: histone deacetylase 11-like [Ailuropoda melanoleuca] (9e-82) |
| GeneOntology terms | GO:0000118 histone deacetylase complex GO:0003674 molecular_function GO:0004407 histone deacetylase activity GO:0005515 protein binding GO:0005634 nucleus GO:0005886 plasma membrane GO:0014003 oligodendrocyte development GO:0016575 histone deacetylation GO:0016787 hydrolase activity |
| InterPro families | IPR000286 Histone deacetylase superfamily |
| Orthology group | MCL17973 |
Nucleotide sequence:
ATGATAGCAGAAGTGCCAGTAATTGCCTGCGTACCCAATTTTTTAGTTCAAAAGGCCTAT
TTGAAACCTATGAGACTACAAACGGGGGGCACAATCTTAGCTGGTAAATTGGCTCTGGAG
CGAGGCTGGGCAATCAATATAGGAGGTGGATTCCATCATTGTAGTGCGGGAAAGGGAGGT
GGATTTTGTGCATATGCGGATATAACACTGCTTATCAAGAATTTAGTATTGCATAGGGGA
GTCCAGAACACTATGATTGTCGATTTAGATGCGCATCAGGGTAATGGCTACCAGCATGAC
TTCCTCGGTATCCCGGAGGTGTATATAATGGATATGTATAACAGACACATCTATCCGAGA
GACGAGGAAGCCAAGAGGGCCATTAGACGGAAGATAGAGCTCGGCAACAAGGTCGAAGAC
CTGGAATATATGATCAAGTTGAGGAAAAATCTGAGGGAAGCCTTAAAGGAGTTCAAACCT
GATATCCTGGTGTATAACGCGGGCACTGATATCCTGGATTCAGATCCCTTAGGACATATG
AGGATCAGTGATGTTGGTATCATAAAACGTGACGAGTTCGTGTTCGAGATCTGCAAGGAG
CAAGACATTCCAGTAGTGATGCTGACCAGCGGTGGTTACTTAAGAAGAACAGCGAAAATT
ATAGCCGACTCTATAATGAATCTCAAGAACAAAGGCCTCATCGGATGTACAAGGTACCAA
AAGTATTAG
Protein sequence:
MIAEVPVIACVPNFLVQKAYLKPMRLQTGGTILAGKLALERGWAINIGGGFHHCSAGKGG
GFCAYADITLLIKNLVLHRGVQNTMIVDLDAHQGNGYQHDFLGIPEVYIMDMYNRHIYPR
DEEAKRAIRRKIELGNKVEDLEYMIKLRKNLREALKEFKPDILVYNAGTDILDSDPLGHM
RISDVGIIKRDEFVFEICKEQDIPVVMLTSGGYLRRTAKIIADSIMNLKNKGLIGCTRYQ
KY