| New model in OGS2.0 | DPOGS208552 |
|---|---|
| Genomic Position | scaffold28:- 91634-92872 |
| See gene structure | |
| CDS Length | 630 |
| Paired RNAseq reads | 308 |
| Single RNAseq reads | 973 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010325 (2e-104) |
| Best Drosophila hit | CG8885 (6e-76) |
| Best Human hit | protein SCO1 homolog, mitochondrial precursor (4e-55) |
| Best NR hit (blastp) | PREDICTED: similar to GA21389-PA [Tribolium castaneum] (1e-84) |
| Best NR hit (blastx) | PREDICTED: similar to GA21389-PA [Tribolium castaneum] (3e-83) |
| GeneOntology terms | GO:0005743 mitochondrial inner membrane GO:0008535 respiratory chain complex IV assembly GO:0005739 mitochondrion GO:0016531 copper chaperone activity GO:0006825 copper ion transport GO:0006878 cellular copper ion homeostasis |
| InterPro families | IPR017936 Thioredoxin-like IPR012336 Thioredoxin-like fold IPR003782 Copper chaperone SCO1/SenC IPR012335 Thioredoxin fold |
| Orthology group | MCL16456 |
Nucleotide sequence:
ATGACTATGACAGCACTTGTAGGGGGAGGGCTGACAGCCTTTATGTTATATGTAAGAAAA
GAGAAACAAGAAGCTTTGGACCGCGATAGAAAGAGGCAGTTGGGCAAAGCTAAGATAGGT
GGAACATTTGAATTGGTTGATTCTGAGGGCAAAATTGTAAAAAGCACTGATTTTCTTGGT
AAATGGTTGTTAATATATTTTGGTTTTACACACTGTCCTGACATTTGCCCAGACGAATTA
GAAAAATTGGCTCTGGTTGTTGATACTCATGACAAAATACCATCAGCCCCACCACTGCAG
CCGCTGTTCATTTCAGTTGACCCTCAAAGAGATACACCCGAGATTGTCGGAAAATACTGC
AAAGAGTTTACGCCAAGGTTGCTAGGATTGACAGGTACAAAGGAACAGGTTCAACAAGCA
TGCAAGTCATACAGAGTATACTTCAGCGCCGGCCCACAGGATGTCGACAATGACTATATT
GTGGATCACACAATTATTATATACCTCGTGGATCCGGATGGTGAGTTTGTGGATTATTAC
GGACAAAACAGAAACGCCAAGGAAATACACGATTCAATTCTTGTGAATATAAAGAAATAC
GAGGACGGGAAGAAATCATCTTGGTTCTGA
Protein sequence:
MTMTALVGGGLTAFMLYVRKEKQEALDRDRKRQLGKAKIGGTFELVDSEGKIVKSTDFLG
KWLLIYFGFTHCPDICPDELEKLALVVDTHDKIPSAPPLQPLFISVDPQRDTPEIVGKYC
KEFTPRLLGLTGTKEQVQQACKSYRVYFSAGPQDVDNDYIVDHTIIIYLVDPDGEFVDYY
GQNRNAKEIHDSILVNIKKYEDGKKSSWF