| New model in OGS2.0 | DPOGS208485 |
|---|---|
| Genomic Position | scaffold28:+ 36341-40821 |
| See gene structure | |
| CDS Length | 1254 |
| Paired RNAseq reads | 111 |
| Single RNAseq reads | 354 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010321 (3e-39) |
| Best Drosophila hit | CG2202 (7e-26) |
| Best Human hit | zinc finger protein 62 homolog isoform 2 (8e-35) |
| Best NR hit (blastp) | PREDICTED: zinc finger protein 813 [Callithrix jacchus] (9e-39) |
| Best NR hit (blastx) | PREDICTED: zinc finger protein 813 [Callithrix jacchus] (2e-49) |
| GeneOntology terms | GO:0045449 regulation of transcription GO:0005634 nucleus GO:0046872 metal ion binding GO:0006350 transcription GO:0008270 zinc ion binding GO:0003676 nucleic acid binding GO:0005622 intracellular |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR022755 Zinc finger, double-stranded RNA binding IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL40524 |
Nucleotide sequence:
ATGTTAAAATGTCGAGCGTGTCTTAAAGATGAAGAATATTTGGTGCCATTTAATGACCAA
GATATTGATTACTTTAATTTACTTACTGATATAAATAATATCAAGGTAGAAATAGAGAAT
ACTCTCTTTGTGCAAAAAAGTGAAGTAAAAGAGGATTGTATTGATGAGATATTAGAAGGA
GGTTTGATTGATAATGAAGAAACAGATTATGATTTATTCAATAATGTTAATATTAAAACA
GAAGACAGTGAAGATATGAGTGGAAAGCTAACAAGACCTTCTAACATAACAAGAAAGAAA
ACACTTCTGTCTTGTGGACTCTGCATCAAAACTTTTAGAGAAGCCGATCTACTAACACTC
CATCTGGCATGTCATAAAATTAGTAATTCGTGCAAAATATGTTCCCAAAATTTCACTGAG
TGGCCGGCATTATACGCTCACCGATTGGAACACCTGACAAACAAACAAAAACATTGCCAC
ATATGTTTGAAAAAATGTTACAAACCACAATATCTAGAATACCATTACAGAAAGTTTCAC
ACAGAAGACAAAGATTACACTGTAAAATGTTCTGAATGTAGTCACACCTTTACAACACCG
AAGAGATTACAGAAGCACATGTGGGCCAGCCATTCCAACAGGAAGTTCTACTGTGATCAT
TGTCCTAAAATATTCAAAAATAAAAGTGCCATTAAATCGCATATGCCAATTCATATGGAC
AATAAAAATGTGAAGTGCGGTTTGTGCGACTACACCTGCAAGTATCTCAGTAATTTACAA
ATTCACAAGCTAAGACGACATACACCACAAAAAGCATATTGCAAGAAATGCACTCGCGTT
TTCTGTGATAAAGAAAAGTTGGACGGTCACAAATGCTCAGAAAAAGGTACCATATGTCCG
GTGTGCGGTAAAATTGTGAAAACGCACAGATTGTTACGACGCCATATGGAAAGTCACGAT
AGCGCGGGAAAGTACAAATGCGAGCGGTGTCCAAAAGTGTACAAGTCGAAGAGCTCACTA
GCGACACACAAGCTGATACACGACGGGGTGCGAACTAAACAGTGTGAATATTGCAACGCA
AAGTTCTTCTCGGGATCTGTTCTTATAAAACACAGAAGGATACATACCGGTGAAAAGCCG
TACGTGTGTCGGGTTTGTTGTCGAGGTTTCACTAGCAACCACAACTTGAAGGTGCACATG
AGAGTCCACGGCGAATACTTGATAGAAAGAAAAAAAACTGATGATGGTGCTTGA
Protein sequence:
MLKCRACLKDEEYLVPFNDQDIDYFNLLTDINNIKVEIENTLFVQKSEVKEDCIDEILEG
GLIDNEETDYDLFNNVNIKTEDSEDMSGKLTRPSNITRKKTLLSCGLCIKTFREADLLTL
HLACHKISNSCKICSQNFTEWPALYAHRLEHLTNKQKHCHICLKKCYKPQYLEYHYRKFH
TEDKDYTVKCSECSHTFTTPKRLQKHMWASHSNRKFYCDHCPKIFKNKSAIKSHMPIHMD
NKNVKCGLCDYTCKYLSNLQIHKLRRHTPQKAYCKKCTRVFCDKEKLDGHKCSEKGTICP
VCGKIVKTHRLLRRHMESHDSAGKYKCERCPKVYKSKSSLATHKLIHDGVRTKQCEYCNA
KFFSGSVLIKHRRIHTGEKPYVCRVCCRGFTSNHNLKVHMRVHGEYLIERKKTDDGA