| New model in OGS2.0 | DPOGS208489 |
|---|---|
| Genomic Position | scaffold28:+ 87547-91408 |
| See gene structure | |
| CDS Length | 1632 |
| Paired RNAseq reads | 136 |
| Single RNAseq reads | 400 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA010340 (8e-18) |
| Best Drosophila hit | CG12299 (5e-33) |
| Best Human hit | zinc finger protein 2 homolog (4e-49) |
| Best NR hit (blastp) | PREDICTED: similar to novel KRAB box and zinc finger, C2H2 type domain containing protein [Monodelphis domestica] (1e-59) |
| Best NR hit (blastx) | PREDICTED: similar to Zinc finger protein 658, partial [Equus caballus] (3e-64) |
| GeneOntology terms | GO:0005622 intracellular GO:0005634 nucleus GO:0003677 DNA binding GO:0046872 metal ion binding GO:0008270 zinc ion binding GO:0006355 regulation of transcription, DNA-dependent |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
| Orthology group | MCL40525 |
Nucleotide sequence:
ATGACAAAGGAAAAGGGAATACAGACTGATTGTAATGATTTGATTAAATTATGCGAAGAG
AATGGTCCAAGAAGGATTAACTTTAAGGATGAAGATTTTAAAACAGAGTATGAAGAAAGT
CATGAGGTTGAATATTTGGACGATGATTTCTTTGAATCAAATGATATTGTCACAAAAGAT
GTTGTCCATAGCATGAACAGAGAAACACAGCAAAATGATATGAAAACATTGATAGAAATG
AAATCTGAAAAAGCGGTAAAGAACTTCCGTAAAATAAAAACATTAAGAGCTCATATGAAG
AAGTGTAGAAATACAGAAGTGAAAAATTCTTTTCCCTGCGGAAAATGTAAGGAGACATTC
AGCCACGAACAAGACCTGTGCATACATTCAGCATTACATACCAAAGGGAATAAGTGGACT
TGTAACGAATGTCAGAAAGAATTCACTGAGAGGAACCGTTTCCGTCGTCACATCCGCCGT
CACATGGCGTGCTGGAGGCTGGCCTGTGACGCGTGCGGCAAGACCTTCGCTGAGCCGTGC
GCGCTACGCAGACATGCGCGTGTTCATACCGGCGAGAGGAAAGAGAAGACACTGCGCTGC
GACATCTGTGACAAACGTTTCAGCGACCGCACCCAGCTAGCGACACATTCCACCCGTCAT
AGCGGCCTCATGCCCTGTTCGTGTTCCGTCTGCGGTAAGGCGTTTCCATCTCAGAGACTG
CTCGCCTCGCACGCTCGTGTACACTCAGACTTGAAGCCCTACGCCTGTCTCTACTGTGAC
AAACGATTCAGGCACGAGTCCACCAGGAACACACACCACCGCACCCATACCGGCGAAAAG
CCATACGTATGTTCCATATGCGGAAAAACCTTCATACAGAACTCTAACCTCAAGCTGCAC
ATGAGGACTCACACGGGTGAGAGGCCCTACACCTGCAACGACTGCGGCAGCAAATTCACA
TCCAGCTCGTCTCTGACGTGTCACCGCCGAATACACACGGGAGAGAAACCATACGAATGT
CCTTATGAACGCAAGTACAAAGCTCATTTTGATATAAAACCTCAGTACGTGCCACGAGAG
AAACCCTTCGAGTGTGCTATTTGTTCGGAGAAGTTCGGTCGGAAAAATTACTTGGTAAAG
CATCTCCGGACACACAAAAATAAAGTAAATAAGGATACGGTGAAAAATCAGGAAATAGTT
ATTCTCCAGGAAGTGCCATTTGTTGTGGAGGATAGCGTTATATACAATGAGGACCCCGGC
AACGAAGTATCCCTAGACACCGGCGTCAATACTGTTAGTAACAAAAATATAACTTTGGAA
GTGTCCGAGGAAATCCCAATAGGGGTCTCGGGAGAACTTATTTTACACGAAAATGGTGAA
GAGAAGACAGAGCTGGTGGTGGTGGACAACATTCAGAATGGTATGAATTTCACCAACGGT
GATATATGTCTTGATGGGAACGTCAACTATGTGAATGATGTCAGTTTAGTTGGAGTCAAC
GATGATGTACCATCATCAGCCTCATCTGCCGAGGAAACCACCATGAAACTTTACAAATTG
GACCAAAGTTTAGTACAAATACAAACATCCACCGGACAACTTACAATAAGGAAAATGACA
GCTAACTTTTAA
Protein sequence:
MTKEKGIQTDCNDLIKLCEENGPRRINFKDEDFKTEYEESHEVEYLDDDFFESNDIVTKD
VVHSMNRETQQNDMKTLIEMKSEKAVKNFRKIKTLRAHMKKCRNTEVKNSFPCGKCKETF
SHEQDLCIHSALHTKGNKWTCNECQKEFTERNRFRRHIRRHMACWRLACDACGKTFAEPC
ALRRHARVHTGERKEKTLRCDICDKRFSDRTQLATHSTRHSGLMPCSCSVCGKAFPSQRL
LASHARVHSDLKPYACLYCDKRFRHESTRNTHHRTHTGEKPYVCSICGKTFIQNSNLKLH
MRTHTGERPYTCNDCGSKFTSSSSLTCHRRIHTGEKPYECPYERKYKAHFDIKPQYVPRE
KPFECAICSEKFGRKNYLVKHLRTHKNKVNKDTVKNQEIVILQEVPFVVEDSVIYNEDPG
NEVSLDTGVNTVSNKNITLEVSEEIPIGVSGELILHENGEEKTELVVVDNIQNGMNFTNG
DICLDGNVNYVNDVSLVGVNDDVPSSASSAEETTMKLYKLDQSLVQIQTSTGQLTIRKMT
ANF