New model in OGS2.0 | DPOGS208501  |
---|---|
Genomic Position | scaffold28:+ 356348-359626 |
See gene structure | |
CDS Length | 3279 |
Paired RNAseq reads   | 646 |
Single RNAseq reads   | 1749 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA010603 (0.0) |
Best Drosophila hit   | synaptojanin, isoform A (0.0) |
Best Human hit | synaptojanin-1 isoform d (0.0) |
Best NR hit (blastp)   | synaptojanin [Culex quinquefasciatus] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to synaptojanin CG6562-PB, isoform B [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0048488 synaptic vesicle endocytosis GO:0007269 neurotransmitter secretion GO:0004445 inositol-polyphosphate 5-phosphatase activity GO:0016311 dephosphorylation GO:0046030 inositol trisphosphate phosphatase activity GO:0043195 terminal button GO:0012506 vesicle membrane GO:0004439 phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity GO:0003723 RNA binding GO:0048790 maintenance of presynaptic active zone structure GO:0050803 regulation of synapse structure and activity |
InterPro families    | IPR002013 Synaptojanin, N-terminal IPR005135 Endonuclease/exonuclease/phosphatase IPR012677 Nucleotide-binding, alpha-beta plait IPR015047 Domain of unknown function DUF1866 IPR000300 Inositol polyphosphate-related phosphatase |
Orthology group | MCL11687 |
Nucleotide sequence:
ATGGCTATGTCTAAAGGGTTTAAGGTTTTAGAGAAATCTTCTCCACCTAATCCATATAGT
ATTATCCTCCAGCACAGAAATAAAGACACCGCACTATTATTCGAATCTCAGGCTGTTGTT
GCGCTGTCTTCACAAGAAACAGAAACTTTACGGAAGCAGTATCATAAAATTGCTGATGCG
TATGGATGTTTAGGAGTTTTACAACTAAATTCTGGTGAAAGTTGCTTGCTGTACCTGGTT
CTTGTCACGGGTTGCTGTTCGGTTGGTAAGGTAGGTGATGTAGAGGTCTTCAAAATTACT
CAAACACAATTTCTACCACTTTTCTATCAATCTCAAGGAGAAGATAAAGTGTCAGAGGTG
AGAAAATTACTTAATTCAGGAACTTTCTACTTTTCTTGGAATGCTAGTAGAAATAATGAA
AACTTATTTGATCTAACACTATGTGCTCAAAGGAAAAGTAAAGGAGGCAGTCCAGACAAT
AGATTTTTCTGGAATAGAACATTGTTCATCCATTTGATAAGATATGGAATAGATTGCGAT
GACTGGCTCACTAGGGCTATGTGTGGTTCAGTTGAGATAAGAACTATATATGTTGGACAT
CGGCAAGCTAGAGCTGTATTAGTGTCTAGACTTAGTTGTGAGAGAGCTGGCACAAGGTTT
AATGTGCGAGGATGCAATGATGATGGAAATGTTGCAAATTTTGTGGAAACTGAGCAGGCA
ATATATATTGATGATTCTGTAGCATCTTACATTCAAACTAGGGGATCGGTCCCTTTATTT
TGGGAACAACCAGGTATACAAGTTGGATCGCACAAGGTAAAGATGTCAAGGGGCTATGAT
GCATCAACAAGTGGTTGTGAGAGACACTTCTCTCAGCTACAAAGGAACTATGGTTCTATT
GTTGTCGTAAACCTTCTTGGTTCAAGTTTGATTGGAGGAAGTGAAGGGGAGGCTACTCTG
AGTAATGCATTTCAAAGACATCTCAATGAATCTGCCCAAACTGACATTGTACAGATAATT
TTTGATTATCATCAAGAAGTAAGAGCTGCTTCTATAGAAACTGCTTTGGCAAAATTTAAG
AAGATAATAGAAAAGTGCTATGACAGCATTAGTATTTTTAGTGCTAAGGGTAATGATATT
TACAATGTTCAAAAAGGTGTAATAAGAACTAATTGTTTGGATTGCTTGGACAGAACTAAT
TCTATACAAACTTTTATTGGCCTGGAAATGCTGGCTATTCAGCTAATGTTATTACAGTGT
ATTGACAAAAAGCAGAATGTAAATAGATTTGAAGAAGTTTTTAAGCAGATGTGGGTAAAT
AATGGTAATGAAGTGTCTAAAATATATGCTGGGACTGGTGCAATTCAAGGTGGCTCAAAA
CTAATAGATGGAGCGAGGTCAGCTGCTCGCACCATACAAAACAACTTACTTGACAACTCT
AAACAAGAAGCTATCGATATATTGCTTTTAGGATCCACACTGAATTCAGAGCTTGCGGAT
CGAACAAGAATACTACTACCATCTAATATTCTACATACCTCAACACCAGTATTAAGAGAA
ATGTGCAGGAGATCCAGTGAATTTACACAGCCTTCCAGTATCCGTATAACTATTGGTACA
TATAATGTAAATGGTGGCAAACATTTTAGAAGTTTAGCTTATAAAGACGTATCACTCGCC
GACTGGTTGTTAGATTCACCAAATTCATCATTAATTAACACTGTTAATTTGAAAGATCAT
CCATCAGACATTTTTGCTATTGGCTTCCAAGAGATTGTCGACCTTAATGCTAGTAATATC
ATGGCAGCAAGCTCAGAACACGCAAGAGCGTGGAGTGAAGAACTTGAGAAAATATTATGT
AGAGATGCCTCTTACACTCTTCTGTCTAGTCATCAACTGGTTGGAGTTTGTCTATTTGTT
TTTGCTAGAAAAGATTTAATTCCACATATAAGAGATGTTGCTCTCGATTCTGTTAAAACT
GGCCTCGGCGGAGCTACAGGAAACAAAGGCGCAGTGGCAATTCGTTTGGTTATATACGGA
ACCTCTTTGTGTTTTGTTTGTGCTCATTTCGCTGCAGGTCAATCGCAAGTTACGGAACGA
AATGCCGATTACACTGAAATCACTAGGAAAATTGCGTTTCCTATGGGAAGATCACTTTAT
TCTCATGATTACGTGTTTTGGTGTGGTGATTTTAATTATCGAATTGATTTAGATAAAGAA
GAGACTCGATTATTGGCATCTCAGAATAATATACAAAGACTTCTAGATCAAGACCAATTA
TTACGCCAGAAATCACAGGATCTAGTCTTCAAAAACTGTTTTGAAGGAGAAATTACTTTC
TTACCAACTTATAAATATGATTTATTTAGCGACGATTACGATACGAGTGAAAAATGTAGA
GCCCCGGCCTGGACTGATAGAGTCCTTTGGAGAAGTAGAAAACATACAATTGATCCTGAA
AATACTTCTGAACTGGCTGCTGGAATATTACTGCATTATGGCAGGGCTGAATTAAAGCAA
AGCGACCATCGTCCGGTTATTGCAATTTTAGAGATTGAAGTTCTACAAGTTAGTTACACT
AGATGTATGGAAGTTTTTTATGAAGTTGTTAAGGACCTTGGCCCTCCCGACGCCAGTATT
ATTGTAAAACCAATGGAAGAAATAGACAGCGAAGATTCCATTTTCGATGATAACATAATG
GCAGGCGTTTTACAAGAATTGTCAACCATTGGTGAAGTGACATTAGTACGTTTTGTCGAC
GACCATACTTTGAGTATAACTTTTAGGGATGGCCAGCATGCATTAGCTGCGTCACAGAAA
GGATACATTAACATTGGTGACATTCAGTTGACCATGTCCCTAAAGTCTCCTAATTGGCTG
GATATTGTAAAGGCCGAGGTTAATTTGTGTTCCAATAACACGATTCCACTATTTGGCGAA
GTTCCCGCCGATCGTCCCTTGCGGTCAGCTCCGCCGACTCCTCGGAGACAGCAGCCGAGT
CGACCGCCGGCTCCATCGCCCACGCCTCTTGTACCTTCGAGAGCACCAACTGGACCAGCG
CGCCCGCCACCTCCTAGGCCCGCTCCTATTCCTCAAGACGTAGGGATAGTCTCTCAGCAA
AGTTTATCGTCACCTCCAGCCGATAGCCTGCCGCCACCAACATGTGCTCCTCCCCCTCCT
CCTTCTAATACCCCACCCCCTACGGGACATCCGCCTCCAGTACCAGCGCGACAAGGTGCG
CCACCACCTCTACCAGCGCGCCCAAGGCCAGTTATGTAG
Protein sequence:
MAMSKGFKVLEKSSPPNPYSIILQHRNKDTALLFESQAVVALSSQETETLRKQYHKIADA
YGCLGVLQLNSGESCLLYLVLVTGCCSVGKVGDVEVFKITQTQFLPLFYQSQGEDKVSEV
RKLLNSGTFYFSWNASRNNENLFDLTLCAQRKSKGGSPDNRFFWNRTLFIHLIRYGIDCD
DWLTRAMCGSVEIRTIYVGHRQARAVLVSRLSCERAGTRFNVRGCNDDGNVANFVETEQA
IYIDDSVASYIQTRGSVPLFWEQPGIQVGSHKVKMSRGYDASTSGCERHFSQLQRNYGSI
VVVNLLGSSLIGGSEGEATLSNAFQRHLNESAQTDIVQIIFDYHQEVRAASIETALAKFK
KIIEKCYDSISIFSAKGNDIYNVQKGVIRTNCLDCLDRTNSIQTFIGLEMLAIQLMLLQC
IDKKQNVNRFEEVFKQMWVNNGNEVSKIYAGTGAIQGGSKLIDGARSAARTIQNNLLDNS
KQEAIDILLLGSTLNSELADRTRILLPSNILHTSTPVLREMCRRSSEFTQPSSIRITIGT
YNVNGGKHFRSLAYKDVSLADWLLDSPNSSLINTVNLKDHPSDIFAIGFQEIVDLNASNI
MAASSEHARAWSEELEKILCRDASYTLLSSHQLVGVCLFVFARKDLIPHIRDVALDSVKT
GLGGATGNKGAVAIRLVIYGTSLCFVCAHFAAGQSQVTERNADYTEITRKIAFPMGRSLY
SHDYVFWCGDFNYRIDLDKEETRLLASQNNIQRLLDQDQLLRQKSQDLVFKNCFEGEITF
LPTYKYDLFSDDYDTSEKCRAPAWTDRVLWRSRKHTIDPENTSELAAGILLHYGRAELKQ
SDHRPVIAILEIEVLQVSYTRCMEVFYEVVKDLGPPDASIIVKPMEEIDSEDSIFDDNIM
AGVLQELSTIGEVTLVRFVDDHTLSITFRDGQHALAASQKGYINIGDIQLTMSLKSPNWL
DIVKAEVNLCSNNTIPLFGEVPADRPLRSAPPTPRRQQPSRPPAPSPTPLVPSRAPTGPA
RPPPPRPAPIPQDVGIVSQQSLSSPPADSLPPPTCAPPPPPSNTPPPTGHPPPVPARQGA
PPPLPARPRPVM