New model in OGS2.0 | DPOGS215115  |
---|---|
Genomic Position | scaffold1162:- 123-3286 |
See gene structure | |
CDS Length | 573 |
Paired RNAseq reads   | 48 |
Single RNAseq reads   | 136 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007867 (5e-13) |
Best Drosophila hit   | CG1832, isoform A (7e-27) |
Best Human hit | zinc finger protein 836 (3e-30) |
Best NR hit (blastp)   | PREDICTED: similar to zinc finger protein 35 [Acyrthosiphon pisum] (4e-36) |
Best NR hit (blastx)   | novel KRAB box and zinc finger, C2H2 type domain containing protein [Mus musculus] (2e-36) |
GeneOntology terms    | GO:0008150 biological_process GO:0005575 cellular_component GO:0003674 molecular_function |
InterPro families    | IPR007087 Zinc finger, C2H2-type IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding IPR015880 Zinc finger, C2H2-like |
Orthology group | ND |
Nucleotide sequence:
ATGTCAGATCTAACTGAAGAGCCAGCTGAAGAAATTGTGATTAAATGCGAAGTTATTGAA
ATATCAGACGAGGATGATTCACAGGAAATAAAAAAAAAGCGGCGGAAGCGTTTAACGTCA
AAAGAGCCAAAGCCATGTGATATTTGCGGTAAAATTTTCCAAACTGGTTATGAGTTGAAG
AAACACAAACGGACACACACTGGGGAGAGGCCGTATATGTGCACAACTTGCGGGAAGACA
TACACACAGCTCGGGCATTTGAGTATACACAGCTTGTCGCATAAAGGTATAAAGAATTTC
AATTGCAACGCGTGCGGTTCGTCCTTCTACAGGAAGGCAGATTTGGATAGGCACGAAAAA
ATACACACAGGTGAGAAGCCATACCAATGCGAACTCTGCTCGAAAAGTTTCACCCAAAAA
AATAATCTAGTTATGCATTTCAAAATGCACATCGGCGACAAACCGCACAAGTGCGACGTC
TGCGACAAGAGGTTCCTGACTAGATCAAAGATGATGTTGCATTCTAAAAAACACGAAAAG
GAGAAAAAGAAAAAAGATTTTATTATGGACTAG
Protein sequence:
MSDLTEEPAEEIVIKCEVIEISDEDDSQEIKKKRRKRLTSKEPKPCDICGKIFQTGYELK
KHKRTHTGERPYMCTTCGKTYTQLGHLSIHSLSHKGIKNFNCNACGSSFYRKADLDRHEK
IHTGEKPYQCELCSKSFTQKNNLVMHFKMHIGDKPHKCDVCDKRFLTRSKMMLHSKKHEK
EKKKKDFIMD