New model in OGS2.0 | DPOGS212593  |
---|---|
Genomic Position | scaffold1761:- 8123-10171 |
See gene structure | |
CDS Length | 792 |
Paired RNAseq reads   | 15 |
Single RNAseq reads   | 45 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA005207 (2e-41) |
Best Drosophila hit   | CG12512 (2e-28) |
Best Human hit | acyl-CoA synthetase family member 2, mitochondrial precursor (4e-24) |
Best NR hit (blastp)   | PREDICTED: similar to CG12512 CG12512-PA [Tribolium castaneum] (1e-39) |
Best NR hit (blastx)   | AMP-binding enzyme family protein [Tetrahymena thermophila] (3e-33) |
GeneOntology terms    | GO:0008150 biological_process GO:0003824 catalytic activity GO:0016208 AMP binding |
InterPro families    | IPR020845 AMP-binding, conserved site IPR000873 AMP-dependent synthetase/ligase |
Orthology group | ND |
Nucleotide sequence:
ATGTATATGTTTATCTTAGAATCCCGGCCATTCTCAACAGTTCAGGACAGTTACCTCAAG
AACCCCGGCAGTGAACCCTTGATTGCTGCCACGTTCGGTGACCGTCTCGCCGACACAGCT
CACAGGGACCCAGGGAAGATTGCGATAAAGTCAATACATGAAGATGTGACACTCACATAT
GAAGACTTGATGAAAAAGGCTGACTCATTTGGATGCGGGCTTCAAGCTGTGGGTTATGAA
GCGGGTGATAAGCTAGGAATTTGGTCTCATAACTGTTCCCAATGGGTCATAGCTGTCATC
GGTGCCGTGAGAGCTGGAATAATACCGGTTTTAATAAACCCAATGTATGAAAAATCTGAA
TTAAGTTATTGCATCAATAAAACCGAATTGAAGGGATTGTTCATTGGAGAAACGATCAGA
AATAAAAATTACAATAAGACGCTATATGAAGTGTTGCCAGAGCTGTATTCGTGTAATGCT
GGGGGTCTCACGACAAGACAATTTCCAAATTTATCATCAGTCATAACTGCCGGAAAGGAA
AAGACGAACGGTATTTTCAATATGGACAACCTTATAGACGAGAATATAAATAGAAATCCA
GTAATAAATGGAAGTACAGTTAAACCAGAAGATGTTTGTATAGTCCATTTTACATCTGGA
TCAACTGGAAATCCGAAAGCAGTTCAGGATTCTCACTTAGGTGTTGTGAATACAACATAT
TTTAGTGGATTAAGAAGTAATTTCAACGAAGACCATCAAATAATATGCGTTCAAGTAATT
ATTTTAATATAG
Protein sequence:
MYMFILESRPFSTVQDSYLKNPGSEPLIAATFGDRLADTAHRDPGKIAIKSIHEDVTLTY
EDLMKKADSFGCGLQAVGYEAGDKLGIWSHNCSQWVIAVIGAVRAGIIPVLINPMYEKSE
LSYCINKTELKGLFIGETIRNKNYNKTLYEVLPELYSCNAGGLTTRQFPNLSSVITAGKE
KTNGIFNMDNLIDENINRNPVINGSTVKPEDVCIVHFTSGSTGNPKAVQDSHLGVVNTTY
FSGLRSNFNEDHQIICVQVIILI