| New model in OGS2.0 | DPOGS213916 |
|---|---|
| Genomic Position | scaffold4059:+ 27-8032 |
| See gene structure | |
| CDS Length | 627 |
| Paired RNAseq reads | 10 |
| Single RNAseq reads | 84 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004624 (2e-86) |
| Best Drosophila hit | ora transientless (1e-64) |
| Best Human hit | glycine receptor subunit alpha-3 isoform a (6e-33) |
| Best NR hit (blastp) | histamine-gated chloride channel [Tribolium castaneum] (8e-92) |
| Best NR hit (blastx) | histamine-gated chloride channel subunit 1 [Tribolium castaneum] (4e-78) |
| GeneOntology terms | GO:0019183 histamine-gated chloride channel complex GO:0019182 histamine-gated chloride channel activity GO:0007268 synaptic transmission GO:0045472 response to ether GO:0009636 response to toxin GO:0030534 adult behavior GO:0005230 extracellular ligand-gated ion channel activity GO:0045211 postsynaptic membrane GO:0006811 ion transport GO:0016021 integral to membrane GO:0043052 thermotaxis |
| InterPro families | IPR006028 Gamma-aminobutyric acid A receptor IPR006029 Neurotransmitter-gated ion-channel transmembrane domain IPR006202 Neurotransmitter-gated ion-channel ligand-binding IPR006201 Neurotransmitter-gated ion-channel |
| Orthology group | MCL15282 |
Nucleotide sequence:
ATGAGAGTATACATTATAAATAAATTTGTGTCTCACACGACAGATGACCTGATCTTCCAG
TGGGATCCTGAGGTACCTTTGGTGGTAGACGAGAACATCGAACTTCCACAGTTGGAGCTG
GTCCAGAACAGAACCGCAGACTGCACCCAGGTTTATTCCACTGGTAATTTCACATGTCTG
GAGGTGATCTTCAAACTGAAGCGTCGTCTTGGATACCACCTGTTCAACACCTACATACCC
ACCTGCCTTATTGTTATTATGTCGTGGGTGTCGTTCTGGATCAAGCCTGACGCGGCGCCA
GCACGTGTCACGCTGGGTGTGACGTCACTCCTCACTCTGTCCACCCAGCACGCCAAATCC
CAAGCACAGCTGCCTCCTGTGTCCTATCTTAAGGCTGTGGATGCTTTTATGTCGGTATGC
ACTGTCTTCGTGTTCATGGCGCTCATGGAGTACTGCCTCGTCAACATCATCCTTGATGAT
AGAGGCGGTAAACCTAAGGAACCAGCTGAAGCCGCTAAGGCGCGAATGAGAGCGGTCAGC
ATCGACCGATTTTCGAGAGTCTTCTTCCCACTTCTCTTCGCAGTGTTGAATGCAACATAT
TGGATACAGTTCGCGCAATACATCTGA
Protein sequence:
MRVYIINKFVSHTTDDLIFQWDPEVPLVVDENIELPQLELVQNRTADCTQVYSTGNFTCL
EVIFKLKRRLGYHLFNTYIPTCLIVIMSWVSFWIKPDAAPARVTLGVTSLLTLSTQHAKS
QAQLPPVSYLKAVDAFMSVCTVFVFMALMEYCLVNIILDDRGGKPKEPAEAAKARMRAVS
IDRFSRVFFPLLFAVLNATYWIQFAQYI