DPGLEAN15843 in OGS1.0

New model in OGS2.0DPOGS212927 
Genomic Positionscaffold235:+ 27451-44191
See gene structure
CDS Length1983
Paired RNAseq reads  25616
Single RNAseq reads  74855
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA011619 (1e-58)
Best Drosophila hit  ribosomal protein L18 (2e-53)
Best Human hit60S ribosomal protein L18 (3e-48)
Best NR hit (blastp)  PREDICTED: similar to rap55 [Tribolium castaneum] (8e-98)
Best NR hit (blastx)  ribosomal protein L18 [Heliconius melpomene] (1e-83)
GeneOntology terms



  
GO:0003735 structural constituent of ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:0006412 translation
GO:0000022 mitotic spindle elongation
GO:0007052 mitotic spindle organization
InterPro families



  
IPR021131 Ribosomal protein L18e/L15
IPR010920 Like-Sm ribonucleoprotein (LSM)-related domain
IPR021132 Ribosomal protein L18e, conserved site
IPR019053 FFD/TFG box motif
IPR000039 Ribosomal protein L18e
Orthology groupMCL13658

Nucleotide sequence:

ATGAGTTCGGGAATGCCTGAACTGGGCTCTAAGATAAGCCTAATATCGAAAGCTGATATT
CGTTATGAAGGCCGACTCTTCACCGTCGATCCTCAAGAATGTACCATCGCCCTGGCTAGC
GTACGGTCTTTCGGCACGGAGGATCGAGAGACTCAGTATCCTGTAGCACCTCAGAACCAA
GTGTATGATTACATTTTGTTCCGAGGATCTGACATCAAGGATATCCGAGTTCTGAACAAT
GTCCCTTCCCTGCCGAACGATCCAGCCATTGTTCAAATGTCCGTACCACCATCGCTCGGT
GGTGGACAAGGTCAAGGGCAGTACTCTGGACAATACAACCATCCTGTGGTCGGGCAAACT
CAATACCCACAATACCATCCCATGGGTGGGTTTCCTGGAAGTGTTCACCCCCAGCTGAAC
AAGACGAGTGAGTTATCTCCACAAACCTCAGTGGATCTGGCCCCACTACAGCCTGTTACT
GCACCAATCGGATCTGGAGTGGTGCATACCAACCAAGTGAAAGACCAAGGTTCAATGCTA
GATCTCATCGGCGGAGGATCCCAGCAGGGTGTTTCTCGTTCAGGGACACCGGCTGTGATC
GGACACAGGAAGAGTCCAACCACTGATCAGGGGACACAGCAGGCCGGTGCATCTGGTCAA
GAGCGTCGTAACAGTAGCGGCAGTAAACAGGCGGGACAGACCCGGCCACGACCCAGTTCC
AGGACACGCCAGCGACAACCCAGCGGCAGCCACAACCCGCCCGCTGAACATATGGACATG
GTTCAAAACAACTACAACCGCGGCGGGACCGCGCCAGCCAGGGCGCCGGGTGGTCGTGGG
TTCGTGCCTCGCAACAAAAACACGCTCAAGTTCGAGAAAGACTACGATTTTGAACAGGCC
AACACTCAGTTCGAGGAACTACGTATACAGCTGGCTAAGACTAAGATAGCCGACGGGGAT
GTTAAAACTGAGGGTGAAGTTGACAAGAAGGATGACTCCGGCAACGAGACCGGCGCGGGG
GAGGCGGAGCTCGAGGAGCATGACGTTATCGCCGGCTACGACAAGAAAAAGAGCTTCTTT
GATAATATTTCATGCGAGGCTGTGGAGAGGTCGAAGGGTCGCAGCCAGAGGACGGATTGG
CGGACGGAGCGCAAGCTGAACTCGGAGACGTTCGGGGTGTCGTCGGCGAGGCGCGGGGCC
TGGAGACCGCGAGCATCCTGGAGGCACGGCCCGCACCCTCCGCACGGACACATGCACCAC
CCTCACCCCCACCCGCACTCTCACCCTCCGGCTCATCCCTGGCGGCCGATGCGAGGCGGT
CGCGGTCGCCCCAACAACAACCCGAACGCTCGCCGCAACACCGCGCCGCCGCCGCAGACG
CAGCCGCAGCCGCAGTCCGCAGCTGACTCTCTTTTTCATCCGGTTGTCAATATGGGTGTC
GACATCAACCATAAACACGACAGGAAAGTCAGGCGTACTGAAGTTAAATCTCAAGATGTA
TACTTGAGGTTGCTTGTAAAGTTATACAGATACTTGGCGAGACGTACAAATGCCAAGTTC
AATCAGATCGTTCTGCGGCGTTTGTTCATGAGCCGTATCAACAGGGCTCCAATTTCCCTG
TCTCGTTTGGCTCGCCACATGAAGAAGCCTACCCGTGAAGGACTTATTGCCGTGGTGGTG
GGTTCAGTAACCAACGACGTGAGGTTGTACAACGTCCCCAAGCTGACTGTTGCCGCTCTT
CACGTCACTGAGAAGGCTCGCGCCCGTATCTTGGCAGCTGGAGGCGAAATCCTAACATTC
GACCAGCTAGCACTCCGTGCGCCCACCGGCCGTAAGACAGTCCTCGTCCAGGGCCGTAGG
AACGCTCGTGAGGCTGTCCGTCACTTCGGCCCGGCCCCAGGCGCTCCTCGCTCTCACACG
AAGCCCTACGTACGTTCCAAGGGACACGAGCGCTCCAGACCTAGCCGTCGCTCTAATGTA
TAA

Protein sequence:

MSSGMPELGSKISLISKADIRYEGRLFTVDPQECTIALASVRSFGTEDRETQYPVAPQNQ
VYDYILFRGSDIKDIRVLNNVPSLPNDPAIVQMSVPPSLGGGQGQGQYSGQYNHPVVGQT
QYPQYHPMGGFPGSVHPQLNKTSELSPQTSVDLAPLQPVTAPIGSGVVHTNQVKDQGSML
DLIGGGSQQGVSRSGTPAVIGHRKSPTTDQGTQQAGASGQERRNSSGSKQAGQTRPRPSS
RTRQRQPSGSHNPPAEHMDMVQNNYNRGGTAPARAPGGRGFVPRNKNTLKFEKDYDFEQA
NTQFEELRIQLAKTKIADGDVKTEGEVDKKDDSGNETGAGEAELEEHDVIAGYDKKKSFF
DNISCEAVERSKGRSQRTDWRTERKLNSETFGVSSARRGAWRPRASWRHGPHPPHGHMHH
PHPHPHSHPPAHPWRPMRGGRGRPNNNPNARRNTAPPPQTQPQPQSAADSLFHPVVNMGV
DINHKHDRKVRRTEVKSQDVYLRLLVKLYRYLARRTNAKFNQIVLRRLFMSRINRAPISL
SRLARHMKKPTREGLIAVVVGSVTNDVRLYNVPKLTVAALHVTEKARARILAAGGEILTF
DQLALRAPTGRKTVLVQGRRNAREAVRHFGPAPGAPRSHTKPYVRSKGHERSRPSRRSNV