| New model in OGS2.0 | DPOGS206719 |
|---|---|
| Genomic Position | scaffold660:- 47937-48695 |
| See gene structure | |
| CDS Length | 759 |
| Paired RNAseq reads | 356 |
| Single RNAseq reads | 1209 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002878 (3e-143) |
| Best Drosophila hit | seven in absentia, isoform B (2e-125) |
| Best Human hit | E3 ubiquitin-protein ligase SIAH1 isoform b (1e-126) |
| Best NR hit (blastp) | PREDICTED: similar to Ubiquitin ligase SIAH1 (Seven in absentia homolog 1) (Siah-1) (Siah-1a) [Apis mellifera] (6e-140) |
| Best NR hit (blastx) | PREDICTED: similar to Ubiquitin ligase SIAH1 (Seven in absentia homolog 1) (Siah-1) (Siah-1a) [Apis mellifera] (1e-139) |
| GeneOntology terms | GO:0004842 ubiquitin-protein ligase activity GO:0030163 protein catabolic process GO:0046872 metal ion binding GO:0008022 protein C-terminus binding GO:0030877 beta-catenin destruction complex GO:0007275 multicellular organismal development GO:0008270 zinc ion binding GO:0006511 ubiquitin-dependent protein catabolic process GO:0005634 nucleus |
| InterPro families | IPR013083 Zinc finger, RING/FYVE/PHD-type IPR013323 Seven In Absentia Homolog-type IPR013322 TRAF-type IPR008974 TRAF-like IPR001841 Zinc finger, RING-type IPR013010 Zinc finger, SIAH-type IPR018121 Seven-in-absentia protein, TRAF-like domain IPR004162 Seven-in-absentia protein, sina |
| Orthology group | MCL12796 |
Nucleotide sequence:
ATGTCCGCAGACCTAGCGTCACTGTTCGAATGCCCGGTGTGTTTCGATTATGTACTGCCA
CCCATCCTGCAATGCCAAAGCGGGCACCTCGTGTGCTCGAGCTGTCGCCCCAAATTGTCC
TGCTGCCCGACCTGCCGCGGCCCCCTCGGCAACATCCGCAACCTGGCCATGGAAAAAGTT
GCTAGTAACGTAATGTTTCCTTGCAAGCATTCTAACACAGGTTGCACAGTCACCCTTGTC
CATACAGAAAAAGCGGAACATGAGGAAGCATGTGAGTTCAGGCCCTATTCCTGCCCCTGT
CCAGGAGCCTCATGCAAGTGGCAAGGTGGTCTGGACCAGGTTATGCCACACCTTATGATG
TCTCACAAAAGCATTACAACGCTGCAAGGTGAAGATATAGTGTTTCTGGCTACTGACATT
AATCTGCCCGGAGCTGTCGATTGGGTGATGATGCAGTCTTGTTTCAATCATCATTTTATG
TTAGTACTAGAGAAGCAAGAAAAATTTGATGGCCACCAGCAATTTTTTGCCATTGTTCAA
CTAATAGGTTCACGAAAGGAAGCCGAGAATTTTGCATATCGGCTTGAACTGAATGGTCAC
AGACGAAGGCTAACCTGGGAGGCGATGCCACGTTCCATACATGAGGGTGTTTCATCGGCC
ATTATGAACTCTGATTGTCTTGTGTTCGACACCTCCCTTGCACAACTGTTTGCGGACAAC
GGGAACCTCGGAATAAATGTCACAATATCTATTGCTTAA
Protein sequence:
MSADLASLFECPVCFDYVLPPILQCQSGHLVCSSCRPKLSCCPTCRGPLGNIRNLAMEKV
ASNVMFPCKHSNTGCTVTLVHTEKAEHEEACEFRPYSCPCPGASCKWQGGLDQVMPHLMM
SHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFNHHFMLVLEKQEKFDGHQQFFAIVQ
LIGSRKEAENFAYRLELNGHRRRLTWEAMPRSIHEGVSSAIMNSDCLVFDTSLAQLFADN
GNLGINVTISIA