| New model in OGS2.0 | DPOGS206729 |
|---|---|
| Genomic Position | scaffold660:+ 40427-45796 |
| See gene structure | |
| CDS Length | 2133 |
| Paired RNAseq reads | 704 |
| Single RNAseq reads | 1670 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002823 (0.0) |
| Best Drosophila hit | CG9139 (2e-58) |
| Best Human hit | rab5 GDP/GTP exchange factor (9e-52) |
| Best NR hit (blastp) | Rab5 GDP/GTP exchange factor [Culex quinquefasciatus] (6e-89) |
| Best NR hit (blastx) | Rab5 GDP/GTP exchange factor [Culex quinquefasciatus] (2e-79) |
| GeneOntology terms | GO:0005085 guanyl-nucleotide exchange factor activity GO:0008270 zinc ion binding GO:0003677 DNA binding |
| InterPro families | IPR002653 Zinc finger, A20-type IPR003123 Vacuolar sorting protein 9 IPR013995 Vacuolar sorting protein 9, subgroup |
| Orthology group | MCL11406 |
Nucleotide sequence:
ATGCCGTCACTGCGAATAGATCAGAGTGATCTGAAGTGCAAGAATGGATGCAACTTCTTT
GGCAATCCTCAGTGGCAAGGGTATTGTTCGAAATGTCACAGGGAACAGCTCCAGAGACAG
CGATGGGCAGAGAGAGGCTTAACCGCGACTCTGCCCAAGCCGGTGCAGAAGAAAATGGAG
CGCTCATTGAAGTTGTCCTCACACTCGTCGTTCTCAAAGTTTGAAGAGAAGCGTCTCCGA
CAGAGCGAGACGCTGAAGAATAAGACGAACCTGCTGAAGTTCAGTGTATTCAGCAAAAGT
AAGACCAGCGAAATTCAAGATCAAACTCCCGAGAGGAAGCCACCGGAGTTCAAGGTCCCG
GCGACCGTGTACGAGCTGATGAAGAAGGATTGGGCTGAAAACTTTTCAAACCTACCGGTG
CAAGTGGACAGGGAATGTAGAGTGTTTGTACATCGCTTCATCTGGGATGTGATCAATTCG
TCTTACGTGATGTCGGTGGACGAACTATCAGAGAGGGTCCAAAGATACTATCAGCAATTC
ATCAAGTACACGGACAACTCCCCCCACCTGGTGAGCGCGGAGCCCGAGCTGAAGGAGAGG
CTCATAGACTTCGTGGAGAAGCACGCCATGACCTACTTGCACGACCTTCCAGGTGTTGTG
TTCTCTCCCCACGGTACTGAGGACGAGCGTCTGGACCGCGCCATGTCGGAACGAATCCAG
CAGCTGAGCTGGGTCGGAGAGAAGCACCTGGAGTGCAAGCTGGACCACTCCAACGAATGC
AGTCAACTGCTGTACAAAGCCATTAGCGAACTGCTGGCTATGGATGGAGCTCCGTATGGT
GGCGGTAAGTTGGCCCACGTCCGCAGAGCGTGCCTCCACGTACTGGAACTGTGCGGTGCG
CCAGCATCAGCTGACGATCTGCTGCCAAAACTCATCTTTACTGTGTTGAAGGCGAATCCC
CCGCGCCTTGTGAGCAACATCAACTTCGTGACACGCTTCTGTAACGCGCAGAGGTTAATG
ACTGGCGAGGCTGGCTATTACTTCACGAACTTGTGTTGCGCGGTGTCCTTCATAGAGAAC
TTGACGGCCGAGTCATTGAGCATGGACAAGAAGGAGTTTGACTGCTATATGGCGATGCCT
GCCTCTATCGGTGGCAGCACTTGGGCGGCTGCATTATCTTTGTGTGGAGCTGTGAAGGAG
GCTGAAGAACAACGACAGCACGCCGAGAAACTGATGGAAGAAATAGAAAAGTTACAGGAT
GACGCCGAACGGCTCGCAAATAACGCTGAAACGTTTGAGAAAGAAATCGCAAAGAAAGTG
CAGGATGTGCTAGCGAAAACTCCGCTGGAAATAAAACCACGTCGAGAACTTCCCCGACTT
CGGATCCTACGGAATTCTACAGGACCACTCATCGACCTCGAAACATCGAAGACCACGGTT
CCAGGAGAAGACAAACAGATGATACCACAGATTAACATACCGGATACGAAGCCGCAAGAG
AAAGTAGACTTGCAGTTCGAAGCTTTGAATAGTAGGACAGAAAACGTTTTAAGTTTCGAC
ATGGACAAATCACCTCCGAAGTCCCCTCAGAACCAGCCGTGGGAATCGAAACAGACGGGA
TCCTTTGAACTCCTCACCCCCTCCCCGATCAGTTTTCCACTCTTCGACTCGAGATCCATC
GACGAGAGGATGGATGAACTGATGACCCCGGAGGAGTTTGGTCCAGATAATCTCAGTCTC
GGCTTGAGTAATATAAACTATGACATAGACCTGTCCGACCTCAGCGGCGATAACAGTTAC
GCTGAAGACACGCCTAAGGAGCCGAAAGACCCTTTCAGTCCTGATGGAATAAAAAAGGAG
CCGTTATTCGATCCATTCGCGCCTCAAACTAGTAATTACGCCATGCTAGAGAAGTTTGAT
GAGTTCACATTGGTGGACACAAAAAATAAAGACGCTTCGGATTCATTCGAAGTGGTTCAT
AGAACGAATGATTTTCAGACGAACGCAGAACAATCCGATCCATTCGGTCTTGTACCAGCT
GAAGCCACTTCAATTTTGGATGAAAATAATTCACCTTCCGGTGCCTGTCTGCTACCATCA
CCACTGTTGCCTCAGAGCAGCAAGAAAAGTTGA
Protein sequence:
MPSLRIDQSDLKCKNGCNFFGNPQWQGYCSKCHREQLQRQRWAERGLTATLPKPVQKKME
RSLKLSSHSSFSKFEEKRLRQSETLKNKTNLLKFSVFSKSKTSEIQDQTPERKPPEFKVP
ATVYELMKKDWAENFSNLPVQVDRECRVFVHRFIWDVINSSYVMSVDELSERVQRYYQQF
IKYTDNSPHLVSAEPELKERLIDFVEKHAMTYLHDLPGVVFSPHGTEDERLDRAMSERIQ
QLSWVGEKHLECKLDHSNECSQLLYKAISELLAMDGAPYGGGKLAHVRRACLHVLELCGA
PASADDLLPKLIFTVLKANPPRLVSNINFVTRFCNAQRLMTGEAGYYFTNLCCAVSFIEN
LTAESLSMDKKEFDCYMAMPASIGGSTWAAALSLCGAVKEAEEQRQHAEKLMEEIEKLQD
DAERLANNAETFEKEIAKKVQDVLAKTPLEIKPRRELPRLRILRNSTGPLIDLETSKTTV
PGEDKQMIPQINIPDTKPQEKVDLQFEALNSRTENVLSFDMDKSPPKSPQNQPWESKQTG
SFELLTPSPISFPLFDSRSIDERMDELMTPEEFGPDNLSLGLSNINYDIDLSDLSGDNSY
AEDTPKEPKDPFSPDGIKKEPLFDPFAPQTSNYAMLEKFDEFTLVDTKNKDASDSFEVVH
RTNDFQTNAEQSDPFGLVPAEATSILDENNSPSGACLLPSPLLPQSSKKS