| New model in OGS2.0 | DPOGS214314 |
|---|---|
| Genomic Position | scaffold1959:- 3769-11167 |
| See gene structure | |
| CDS Length | 1854 |
| Paired RNAseq reads | 546 |
| Single RNAseq reads | 1321 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004126 (0.0) |
| Best Drosophila hit | CG8679 (1e-51) |
| Best Human hit | ankyrin repeat and LEM domain-containing protein 1 (7e-46) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC009633 [Tribolium castaneum] (6e-92) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC009633 [Tribolium castaneum] (6e-92) |
| GeneOntology terms | GO:0005635 nuclear envelope GO:0003674 molecular_function GO:0008150 biological_process |
| InterPro families | IPR020683 Ankyrin repeat-containing domain IPR011015 LEM-like domain IPR002110 Ankyrin repeat IPR003887 Lamino-associated polypeptide 2/emerin |
| Orthology group | MCL14769 |
Nucleotide sequence:
ATGGATACGACGTTTAAAGAGTTATTCAAACTTTATGATATTATACAAAATGATGATTCA
AGTAATGACGATGGAATAACCCCAGTCCATATAGCAGCAATATGGGGTAGAGTGGATAAT
TTGAAGCTGCTTGTTGGCTGCGGCGGAGATCCGTCAAGACGTGATCTGGACGGTATCTCA
GCATTTGATTATGCGGTGAGAGAACAACAGTGGGATGTTTACGATTACTTACATAATGTT
ATTGACAAAAGTGATTCCACTGATCCCATTGAAACGGAGTGTGCGTACACACTTAACATC
GAACGGGTCTTAGTTACAACAGACCACGTGGTGGCGGAATATGAACCACTAAAAGAAAAC
CAGACAGATATAATCAGTAGAAAATCTGATACTATCAGAGATTGGTTGGATAGGAACAGC
TTGGTCATAAATAAATTATATCCCACCATACATGGGGAGACGTACCTCATAGAGGACGAA
TCCGAACCGTGGACTGACGACACCAATAACACTTTCATGACCTGTTGTTCAAAACGCGAA
GTGGAAATAACCGGGGTGCATCCCCTGGAACTGACTTCCGACAAGAGCAAGTTCTCAAAC
GAGAGCAAACAGAGAGCTAGCGTGTATGAAAATTTTTCCCTACCAGGCTCACCCAGTTGC
ATCACGCACAGAAACTATAACAGTAAAACCAGCCTCAGGAAATTGGGTTCCAAAGAGCTG
ATCGCTACCAACCAACTGACATTAGACAGTCATATAACTGATGACGACTCTCAAAGTGAT
CTGGACAAAGCGATGATTATGGTCCAGAATCGCACCAACGAATGGTTGTGCGGTGACGAT
AGGAACAGGAATACTAGGCGATCATCAGCCAGTAGCGGTGTTAGCAGCACTCCATCTGGC
AACATAATGCTGGCTAACGTCCACGAGGAATACAAATACGAGGACCCTGAAGAAGACGTC
GTCCTCATAGAGAGGAGACTACAAGTTTCCTCGATCGTACTGCCGGTAGACGAAGGGTCA
GACGCCGATCAAACGATACATTCAATAGCCTCGTCTTTGCCATTTTCCGTTTCCTACGAC
AACGACGCTCTAAGATCCGAACTCATACGCCTAGGAGTTACCCCGGGTCCCATACAGAAT
ACAACAAGGACGCTGTATTTGAAAAAACTCCAAGCCTTAAAAACGAATCCTGTAATCGCT
GAGCATCAAGAAACTGGTAAAACTTACAGTGTAGAACTAACTAAATCACTCCGCAATGAT
GATTGGTTACAAAATTTGTCTCCATACATCAATATACAGACAAAAGTGCAGGCTGATTTT
GAGAATCCAAAGAAGATTTGGAGGGAAGGTAACGCGAAAACTTCATTCACCTACCTACTA
CTGGATCCACGAGTCACAGGAAACCTCCCGGCCAGAGCCAACAGTCAAAGCCATCAGGTC
TCTTGGACTACATTCATTAACTCCATCTTCTACATCGGTAAAGGTAAACGTTCAAGACCA
TATGCCCATTTATACCAAGCGCTGACACCGTGGAAACACAATATAAGGAAATCAAGCAAA
CAGAAAGTCCAACATATACTGGACATATGGTCGGACGGTTTGGGTGTAATATGTCTGCAT
GTGTTCCAAAACATAATTCCAGCCGAGGCGTACACATATGAGGCTGCAATGATTGACGTC
ATCGGACTCAATAATCTTAAGAATGAGAAAATCGGCAACTACTATGGCGCAGCCGAGCAG
TTGACTAGGAAGGAAAGACGAATGCTTGGGTTATATCTCTTATACAAAGCATTGAATATT
TATATCAACGAAGGTGAAAGGCAACTCAGACCGGACAATGTTAAGGGAGACTGA
Protein sequence:
MDTTFKELFKLYDIIQNDDSSNDDGITPVHIAAIWGRVDNLKLLVGCGGDPSRRDLDGIS
AFDYAVREQQWDVYDYLHNVIDKSDSTDPIETECAYTLNIERVLVTTDHVVAEYEPLKEN
QTDIISRKSDTIRDWLDRNSLVINKLYPTIHGETYLIEDESEPWTDDTNNTFMTCCSKRE
VEITGVHPLELTSDKSKFSNESKQRASVYENFSLPGSPSCITHRNYNSKTSLRKLGSKEL
IATNQLTLDSHITDDDSQSDLDKAMIMVQNRTNEWLCGDDRNRNTRRSSASSGVSSTPSG
NIMLANVHEEYKYEDPEEDVVLIERRLQVSSIVLPVDEGSDADQTIHSIASSLPFSVSYD
NDALRSELIRLGVTPGPIQNTTRTLYLKKLQALKTNPVIAEHQETGKTYSVELTKSLRND
DWLQNLSPYINIQTKVQADFENPKKIWREGNAKTSFTYLLLDPRVTGNLPARANSQSHQV
SWTTFINSIFYIGKGKRSRPYAHLYQALTPWKHNIRKSSKQKVQHILDIWSDGLGVICLH
VFQNIIPAEAYTYEAAMIDVIGLNNLKNEKIGNYYGAAEQLTRKERRMLGLYLLYKALNI
YINEGERQLRPDNVKGD